Detailed information NTG0087704

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ71_RS21855
• Genome accession: NZ_AP027588
• Coordinates: 4439223..4440248 (+)
• Length: 341 a.a.
• NCBI ID: WP_338384412.1
• Uniprot ID: -
• Organism: Escherichia coli strain LR-64-1
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4434223..4445248

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ71_RS21835 (VEE11_42020)	metJ	4435284..4435601 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABJ71_RS21840 (VEE11_42030)	yiiX	4435785..4436393 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABJ71_RS21845 (VEE11_42040)	rpmE	4436454..4436666 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ71_RS21850 (VEE11_42050)	priA	4436869..4439067 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
AABJ71_RS21855 (VEE11_42060)	cytR	4439223..4440248 (+)	1026	WP_338384412.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ71_RS21860 (VEE11_42070)	ftsN	4440340..4441299 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABJ71_RS21865 (VEE11_42080)	hslV	4441392..4441922 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ71_RS21870 (VEE11_42090)	hslU	4441932..4443263 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABJ71_RS21875 (VEE11_42100)	menA	4443330..4444256 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ71_RS21880 (VEE11_42110)	rraA	4444349..4444834 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ71_RS21885 (VEE11_42120)	zapB	4444919..4445164 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.76 Da
• Isoelectric Point: 6.3842

>NTDB_id=87704 AABJ71_RS21855 WP_338384412.1 4439223..4440248(+) (cytR) [Escherichia coli strain LR-64-1]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYVARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=87704 AABJ71_RS21855 WP_338384412.1 4439223..4440248(+) (cytR) [Escherichia coli strain LR-64-1]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACGTCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628