Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RHM61_RS09130 Genome accession   NZ_CP133779
Coordinates   2003621..2004022 (+) Length   133 a.a.
NCBI ID   WP_322250802.1    Uniprot ID   A0AAU0SDJ2
Organism   Undibacterium sp. CCC3.4     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1998621..2009022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RHM61_RS09105 (RHM61_09105) - 1998642..1999658 (-) 1017 WP_322250799.1 LacI family DNA-binding transcriptional regulator -
  RHM61_RS09110 (RHM61_09110) - 1999747..2001005 (+) 1259 Protein_1796 amidohydrolase family protein -
  RHM61_RS09115 (RHM61_09115) hemL 2001017..2002300 (-) 1284 WP_322250800.1 glutamate-1-semialdehyde 2,1-aminomutase -
  RHM61_RS09120 (RHM61_09120) - 2002362..2003183 (-) 822 WP_322251076.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  RHM61_RS09125 (RHM61_09125) - 2003349..2003501 (+) 153 WP_322250801.1 rubredoxin -
  RHM61_RS09130 (RHM61_09130) pilG 2003621..2004022 (+) 402 WP_322250802.1 response regulator Regulator
  RHM61_RS09135 (RHM61_09135) - 2004088..2004453 (+) 366 WP_322250803.1 response regulator transcription factor -
  RHM61_RS09140 (RHM61_09140) - 2004524..2005108 (+) 585 WP_322250804.1 chemotaxis protein CheW -
  RHM61_RS09145 (RHM61_09145) - 2005398..2007587 (+) 2190 WP_416200231.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14705.89 Da        Isoelectric Point: 6.9513

>NTDB_id=876698 RHM61_RS09130 WP_322250802.1 2003621..2004022(+) (pilG) [Undibacterium sp. CCC3.4]
MSISASDENLKIMVIDDSSTIRRSAEIFLGQAGYKIVLAEDGFDALAKINDSHPDLIFCDILMPRLDGYQTCALIKKSAK
FRDTPVIMLSSKDGLFDRARGAMVGSDEYLTKPFTKDSLLKTVRNYTSASNTK

Nucleotide


Download         Length: 402 bp        

>NTDB_id=876698 RHM61_RS09130 WP_322250802.1 2003621..2004022(+) (pilG) [Undibacterium sp. CCC3.4]
ATGTCAATTTCGGCTAGCGATGAAAACTTGAAGATCATGGTGATCGACGACAGCAGTACGATACGTCGGTCGGCCGAGAT
CTTTCTCGGGCAAGCCGGATATAAGATTGTGCTGGCCGAAGATGGCTTCGATGCTTTGGCAAAGATCAATGACTCGCATC
CGGATTTGATCTTTTGCGACATCCTCATGCCGCGGCTCGATGGCTATCAAACCTGCGCCTTGATTAAAAAAAGCGCCAAG
TTTCGCGATACGCCGGTGATCATGCTGTCGTCTAAAGATGGGCTGTTCGATCGCGCCCGCGGTGCCATGGTCGGTTCGGA
CGAATATTTGACCAAACCGTTTACCAAAGACAGCTTGTTGAAAACGGTAAGGAATTACACCTCTGCATCGAACACGAAGT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.934

91.729

0.586