Detailed information NTG0876691

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: RHM61_RS07690
• Genome accession: NZ_CP133779
• Coordinates: 1677922..1678983 (-)
• Length: 353 a.a.
• NCBI ID: WP_322250540.1
• Uniprot ID: -
• Organism: Undibacterium sp. CCC3.4
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1672922..1683983

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RHM61_RS07665 (RHM61_07665)	cyoE	1673483..1674367 (+)	885	WP_322250535.1	heme o synthase	-
RHM61_RS07670 (RHM61_07670)	-	1674364..1674945 (+)	582	WP_322250536.1	SCO family protein	-
RHM61_RS07675 (RHM61_07675)	rpoH	1675093..1675983 (-)	891	WP_322250537.1	RNA polymerase sigma factor RpoH	-
RHM61_RS07680 (RHM61_07680)	-	1676267..1677181 (-)	915	WP_322250538.1	cell division protein FtsX	-
RHM61_RS07685 (RHM61_07685)	-	1677231..1677902 (-)	672	WP_322250539.1	cell division ATP-binding protein FtsE	-
RHM61_RS07690 (RHM61_07690)	pilA	1677922..1678983 (-)	1062	WP_322250540.1	signal recognition particle-docking protein FtsY	Machinery gene
RHM61_RS07695 (RHM61_07695)	rsmD	1679097..1679750 (+)	654	WP_322250541.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
RHM61_RS07700 (RHM61_07700)	coaD	1679804..1680304 (+)	501	WP_322250542.1	pantetheine-phosphate adenylyltransferase	-
RHM61_RS07705 (RHM61_07705)	-	1680353..1680610 (+)	258	WP_322250543.1	YfhL family 4Fe-4S dicluster ferredoxin	-
RHM61_RS07710 (RHM61_07710)	-	1680639..1681772 (-)	1134	WP_322250544.1	sensor domain-containing diguanylate cyclase	-
RHM61_RS07715 (RHM61_07715)	-	1681826..1682683 (-)	858	WP_322250545.1	MOSC domain-containing protein	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37494.56 Da
• Isoelectric Point: 6.0626

>NTDB_id=876691 RHM61_RS07690 WP_322250540.1 1677922..1678983(-) (pilA) [Undibacterium sp. CCC3.4]
MFSFFKRKPKDEPAIATPPTLTEAVPTVPATTVALPAAPAAAELAVAATVAEPESKRSWLSRLKAGLAKTSTNLTTLFIG
ARIDEDLYEELEAALLTADAGVDATLFLLDALKKKVKADKLTEAEQVKAALKQLLLDLLTPLQKPLELGRHQPMVMMIAG
VNGAGKTTTIGKLAKHMQEHGQTVLLAAGDTFRAAAREQLAIWGERNGITVISQESGDPAAVAFDAVASARARCTDVVMI
DTAGRLPTQLHLMEELKKVKRVIAKAMDGAPQEVLLVIDGNTGQNALAQVKAFDDALQLTGLVITKLDGTAKGGVLAAIA
KTRPIPVYFIGIGEQIEDLQAFNAQEFVDALLH

Nucleotide

• Length: 1062 bp

>NTDB_id=876691 RHM61_RS07690 WP_322250540.1 1677922..1678983(-) (pilA) [Undibacterium sp. CCC3.4]
ATGTTCAGTTTCTTTAAAAGAAAACCCAAAGACGAACCGGCCATCGCCACGCCGCCCACATTGACCGAAGCGGTGCCGAC
CGTGCCGGCCACGACTGTCGCGCTGCCTGCTGCGCCTGCCGCAGCGGAGCTCGCCGTTGCCGCCACGGTAGCCGAACCGG
AGAGCAAACGCTCTTGGCTCAGTCGTCTCAAAGCCGGCCTGGCAAAAACTTCGACTAATCTTACCACCCTCTTCATCGGT
GCCCGTATCGATGAAGACTTATACGAAGAACTCGAAGCTGCCTTGCTGACGGCCGATGCCGGCGTCGATGCGACGTTGTT
TCTGCTCGATGCACTCAAGAAAAAGGTCAAGGCAGACAAACTGACCGAAGCCGAGCAAGTCAAAGCCGCCCTCAAGCAAT
TGCTGCTCGATTTACTCACACCGCTGCAAAAGCCGCTGGAACTCGGCCGTCATCAACCGATGGTGATGATGATCGCCGGC
GTCAATGGTGCCGGCAAGACAACTACCATCGGTAAACTGGCCAAGCATATGCAAGAGCATGGCCAAACGGTACTGCTGGC
AGCTGGTGACACTTTCCGTGCAGCGGCACGCGAACAATTGGCAATCTGGGGCGAGCGCAATGGCATCACAGTCATTTCGC
AAGAATCGGGCGACCCGGCCGCGGTGGCCTTCGACGCCGTCGCTTCAGCGCGTGCGCGCTGCACCGATGTGGTGATGATC
GATACGGCAGGACGCTTGCCGACGCAATTGCATCTGATGGAAGAATTGAAAAAAGTAAAACGCGTGATTGCCAAAGCCAT
GGATGGCGCACCGCAAGAAGTCTTGCTGGTTATCGATGGCAATACCGGGCAAAATGCCTTGGCACAAGTTAAGGCCTTCG
ATGACGCCTTGCAATTGACTGGCTTGGTCATCACCAAGCTCGATGGCACCGCCAAAGGTGGCGTCTTGGCAGCGATTGCC
AAAACTCGCCCGATTCCGGTGTATTTCATCGGCATTGGCGAACAAATAGAAGATTTGCAGGCATTCAACGCCCAGGAATT
CGTCGACGCCCTGCTGCACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (74-133)

• SRP54-type protein, GTPase domain (SRP54) (154-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.76	100	0.586