Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | AABJ71_RS05410 | Genome accession | NZ_AP027588 |
| Coordinates | 1100922..1101437 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130211.1 | Uniprot ID | A0ABR8T9Y4 |
| Organism | Escherichia coli strain LR-64-1 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1095922..1106437
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABJ71_RS05365 (VEE11_10350) | csrA | 1096509..1096694 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| AABJ71_RS05395 (VEE11_10360) | yqaB | 1098152..1098718 (+) | 567 | WP_000273290.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| AABJ71_RS05400 (VEE11_10370) | yqaA | 1098715..1099143 (+) | 429 | WP_001287454.1 | YqaA family protein | - |
| AABJ71_RS05405 (VEE11_10380) | gshA | 1099216..1100772 (+) | 1557 | WP_000611804.1 | glutamate--cysteine ligase | - |
| AABJ71_RS05410 (VEE11_10390) | luxS | 1100922..1101437 (+) | 516 | WP_001130211.1 | S-ribosylhomocysteine lyase | Regulator |
| AABJ71_RS05415 (VEE11_10400) | emrB | 1101501..1103039 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| AABJ71_RS05420 (VEE11_10410) | emrA | 1103056..1104228 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| AABJ71_RS05425 (VEE11_10420) | emrR | 1104355..1104885 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| AABJ71_RS05430 (VEE11_10430) | ygaH | 1104976..1105311 (-) | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| AABJ71_RS05435 (VEE11_10440) | ygaZ | 1105301..1106038 (-) | 738 | WP_000445651.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19416.19 Da Isoelectric Point: 5.0362
>NTDB_id=87657 AABJ71_RS05410 WP_001130211.1 1100922..1101437(+) (luxS) [Escherichia coli strain LR-64-1]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=87657 AABJ71_RS05410 WP_001130211.1 1100922..1101437(+) (luxS) [Escherichia coli strain LR-64-1]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCA
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTACGCATCAACAGCAACGAAGAACTGGCA
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.099 |
100 |
0.731 |