Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RE409_RS06840 Genome accession   NZ_CP133763
Coordinates   1422366..1422548 (+) Length   60 a.a.
NCBI ID   WP_053344991.1    Uniprot ID   A0AAX0RSP1
Organism   Peribacillus sp. R9-11     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1417366..1427548
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RE409_RS06825 (RE409_06830) - 1419869..1420060 (-) 192 WP_053344988.1 YjzD family protein -
  RE409_RS06830 (RE409_06835) - 1420360..1421088 (+) 729 WP_201181842.1 alpha/beta hydrolase -
  RE409_RS06835 (RE409_06840) - 1421191..1422021 (+) 831 WP_201181840.1 hypothetical protein -
  RE409_RS06840 (RE409_06845) comZ 1422366..1422548 (+) 183 WP_053344991.1 ComZ family protein Regulator
  RE409_RS06845 (RE409_06850) - 1422596..1422817 (-) 222 WP_053344992.1 hypothetical protein -
  RE409_RS06850 (RE409_06855) - 1423014..1423949 (+) 936 WP_201221667.1 beta-ketoacyl-ACP synthase III -
  RE409_RS06855 (RE409_06860) fabF 1424004..1425242 (+) 1239 WP_201181836.1 beta-ketoacyl-ACP synthase II -
  RE409_RS06860 (RE409_06865) - 1425426..1426196 (+) 771 WP_201249886.1 DUF2268 domain-containing protein -
  RE409_RS06865 (RE409_06870) - 1426305..1427060 (+) 756 WP_053344996.1 YjbA family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6886.03 Da        Isoelectric Point: 4.6509

>NTDB_id=876509 RE409_RS06840 WP_053344991.1 1422366..1422548(+) (comZ) [Peribacillus sp. R9-11]
MSSDKTLEFMGIAMKYFPEAKAKLEANGIPFSMDMAEPFMDLFKKVMQEAYELGKQDAQR

Nucleotide


Download         Length: 183 bp        

>NTDB_id=876509 RE409_RS06840 WP_053344991.1 1422366..1422548(+) (comZ) [Peribacillus sp. R9-11]
ATGAGTTCAGATAAAACACTTGAATTTATGGGAATCGCTATGAAATACTTCCCGGAGGCTAAAGCAAAGCTGGAGGCAAA
TGGAATTCCTTTTTCAATGGATATGGCAGAGCCGTTCATGGACCTGTTTAAAAAAGTTATGCAAGAAGCTTATGAGCTTG
GAAAACAAGATGCTCAGCGTTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.017

98.333

0.6