Detailed information NTG0876334

Bioinformatically predicted

Overview

• Name: fimV
• Type: Machinery gene
• Locus tag: RDJ20_RS10575
• Genome accession: NZ_CP133755
• Coordinates: 2185871..2188630 (+)
• Length: 919 a.a.
• NCBI ID: WP_132569657.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain BJ86
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2180871..2193630

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDJ20_RS10555 (RDJ20_10555)	-	2181506..2182267 (+)	762	WP_010793226.1	class I SAM-dependent methyltransferase	-
RDJ20_RS10560 (RDJ20_10560)	leuB	2182326..2183408 (+)	1083	WP_033971520.1	3-isopropylmalate dehydrogenase	-
RDJ20_RS10565 (RDJ20_10565)	asd	2183478..2184590 (+)	1113	WP_003111187.1	aspartate-semialdehyde dehydrogenase	-
RDJ20_RS10570 (RDJ20_10570)	-	2184692..2185702 (+)	1011	WP_132569659.1	aspartate-semialdehyde dehydrogenase	-
RDJ20_RS10575 (RDJ20_10575)	fimV	2185871..2188630 (+)	2760	WP_132569657.1	motility hub landmark protein FimV	Machinery gene
RDJ20_RS10580 (RDJ20_10580)	truA	2188652..2189509 (+)	858	WP_132569655.1	tRNA pseudouridine(38-40) synthase TruA	-
RDJ20_RS10585 (RDJ20_10585)	-	2189599..2190234 (+)	636	WP_033971512.1	phosphoribosylanthranilate isomerase	-
RDJ20_RS10590 (RDJ20_10590)	accD	2190503..2191375 (+)	873	WP_057388206.1	acetyl-CoA carboxylase, carboxyltransferase subunit beta	-
RDJ20_RS10595 (RDJ20_10595)	folC	2191372..2192661 (+)	1290	WP_132569653.1	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	-
RDJ20_RS10600 (RDJ20_10600)	-	2192665..2193336 (+)	672	WP_196745226.1	SPOR domain-containing protein	-

Sequence

Protein

• Length: 919 a.a.
• Molecular weight: 96890.14 Da
• Isoelectric Point: 3.9526

>NTDB_id=876334 RDJ20_RS10575 WP_132569657.1 2185871..2188630(+) (fimV) [Pseudomonas aeruginosa strain BJ86]
MVRLRTLVRAIAAASVLTSGMAHGLGLGEITLKSALNQPLDAEIELLEVRDLGSGEVIPSLASPEEFSKAGVDRLYYLTD
LKFTPVVKPNGKSVIRVTSSKPVQEPYLNFLVQVLWPNGRLLREYTVLLDPPLYSPQAAASAPQAPVSAPRATGAPRTPQ
APAPVRTTAPAGSDTYRTVSNDTLWEIAQRNRTDRVSVPQAMLAFQELNPGAFVDGNINRLKSGQVLRIPTEQQMLERSP
REALSQVQAQNQSWRGSRNPAAGTAGARQLDATQRNAAGSAPSKVDATDNLRLVSGEGKASKGADKGGKGDSKAIADTLA
VTKESLDSTRRENEELQSRMQDLQSQLDKLQKLIQLKDAQLAKLQGQLGAEGQGAAQPNAALPDASQPNAAAQAPAQPGT
PAAAAPTPAPAGEAPAAPAQTPVAPPPAPAAEKPPAPAVPAPAPVQAAEQPAPSFLDELLANPLWLAVIGGSALLALLVL
LMILSRRNAQKEKEEAQAFAADAGEEQEDALDLGKDGFDDLTLDEPEPQVAAVAPQVEKTTAQTSDALGEADIYIAYGRF
NQAAELLQNAIYDEPQRTDLRLKLMEVYAEMGDREGFARQENELREIGGAQPQVEQLKSRYPAMVAVAAVAGLAGAKLAQ
DELDSFSLDDLSLDDSGHAAKPDAAGQDLDDAFDLSLDDLGGDDVQADLKSDSGALDDLTLDNDLDLAASTAADKPVDDL
DFGLDFAELAETPSQPKHDDLGDFSLDLDAPEDKLSDDDFLLSLNDEVPAATPADNEFTLDTEAAEEPALSLPDDFDLSL
ADEPAEPAAPAKSEDSFAAQLDEVSAQLDELASNLDEPKSAAPSFSAEDAAVASALDGDADDDFDFLSGADEAATKLDLA
RAYIDMGDSEGARDILDEVLAEGNDSQQAEARELLERLA

Nucleotide

• Length: 2760 bp

>NTDB_id=876334 RDJ20_RS10575 WP_132569657.1 2185871..2188630(+) (fimV) [Pseudomonas aeruginosa strain BJ86]
ATGGTTCGGCTTCGTACACTGGTTCGGGCAATCGCGGCGGCCTCGGTCCTGACTTCCGGCATGGCGCATGGATTGGGACT
GGGGGAAATCACCCTGAAGTCGGCGTTGAACCAACCGTTGGATGCCGAGATCGAGCTGCTCGAAGTTCGTGACCTGGGTT
CGGGCGAGGTGATCCCGAGCCTGGCGTCGCCGGAAGAGTTCAGCAAGGCGGGTGTCGATCGCCTGTACTACCTCACCGAC
CTGAAGTTCACGCCGGTGGTGAAGCCCAACGGCAAGAGCGTCATTCGCGTGACCTCGTCGAAACCGGTGCAGGAGCCCTA
CCTGAACTTCCTGGTCCAGGTGCTCTGGCCGAACGGCCGCCTGCTGCGCGAGTACACCGTCCTGCTGGATCCGCCGCTGT
ACTCCCCGCAGGCCGCGGCAAGCGCTCCGCAAGCGCCGGTCAGCGCGCCGCGCGCGACCGGCGCCCCGCGAACCCCGCAG
GCACCGGCTCCGGTGCGTACCACTGCGCCGGCAGGCAGCGACACCTATCGCACCGTTTCCAACGACACGCTCTGGGAGAT
TGCCCAGCGCAACCGTACCGATCGCGTTTCCGTACCCCAGGCGATGCTCGCGTTCCAGGAGCTGAATCCGGGCGCTTTCG
TCGATGGCAACATCAACCGGCTGAAGAGCGGCCAGGTCCTGCGCATTCCCACCGAACAGCAGATGCTGGAGCGCTCGCCG
CGCGAGGCGCTGTCCCAGGTTCAGGCGCAGAACCAGAGCTGGCGCGGCAGCCGCAATCCGGCTGCGGGCACCGCTGGCGC
CAGGCAGTTGGATGCGACCCAGCGCAATGCCGCCGGGTCGGCGCCATCCAAGGTCGACGCCACGGACAACCTGCGCCTGG
TGTCTGGCGAGGGCAAGGCCAGCAAGGGGGCCGACAAGGGCGGGAAGGGCGACAGCAAGGCGATCGCCGATACCCTGGCG
GTGACCAAGGAAAGCCTCGATAGCACTCGCCGCGAGAACGAAGAACTGCAGAGCCGCATGCAGGATCTGCAGAGCCAGCT
GGACAAGCTGCAGAAGTTGATCCAGCTGAAGGACGCCCAGTTGGCCAAGCTGCAAGGGCAGTTGGGCGCCGAAGGCCAGG
GCGCAGCCCAGCCGAACGCAGCCCTGCCGGATGCGTCCCAGCCCAATGCAGCCGCGCAGGCGCCGGCTCAGCCCGGGACT
CCCGCTGCGGCAGCGCCGACTCCTGCTCCGGCCGGAGAAGCACCCGCCGCTCCGGCGCAGACTCCGGTGGCGCCGCCGCC
CGCGCCAGCTGCCGAGAAGCCTCCGGCACCTGCCGTTCCGGCGCCCGCTCCGGTACAGGCGGCAGAACAGCCGGCACCGA
GCTTCCTCGACGAACTGCTGGCCAACCCGCTGTGGTTGGCGGTGATCGGCGGTAGCGCACTGCTGGCGTTGCTGGTGCTG
CTGATGATCCTGTCGCGGCGCAATGCGCAGAAAGAGAAGGAAGAAGCCCAGGCTTTCGCCGCGGATGCCGGCGAGGAACA
GGAGGATGCGCTGGACCTGGGAAAGGACGGCTTCGACGACCTGACCCTCGACGAGCCTGAGCCGCAGGTCGCAGCCGTCG
CTCCGCAGGTCGAGAAGACCACCGCGCAGACTTCCGATGCGCTGGGCGAGGCCGACATCTATATCGCCTACGGGCGTTTC
AACCAGGCCGCCGAATTGTTGCAGAACGCCATCTACGACGAGCCGCAGCGCACCGACCTGCGCCTCAAGCTGATGGAAGT
CTATGCCGAGATGGGCGATCGCGAAGGTTTCGCTCGCCAGGAAAACGAGCTGCGCGAAATCGGCGGCGCACAGCCGCAGG
TCGAGCAGCTCAAGTCGCGCTACCCGGCAATGGTCGCGGTCGCCGCGGTTGCCGGCCTGGCCGGCGCCAAGCTGGCGCAG
GACGAACTGGATAGCTTCAGCCTCGACGACTTGTCGCTCGACGACAGCGGTCACGCGGCCAAGCCGGATGCGGCAGGACA
GGATCTCGACGACGCCTTCGACCTGAGCCTGGACGACCTGGGCGGCGACGACGTGCAGGCCGACCTCAAGTCCGACAGCG
GGGCGCTGGACGACCTGACCCTGGACAACGATCTGGACCTGGCGGCTTCGACCGCGGCGGACAAGCCTGTCGACGATCTC
GACTTCGGCCTGGATTTCGCGGAGTTGGCAGAGACTCCGAGCCAACCCAAGCATGACGACCTGGGCGATTTCTCCCTGGA
TCTCGACGCGCCGGAAGACAAGCTTTCGGACGACGATTTCCTGCTTTCGCTGAACGACGAGGTGCCCGCCGCGACGCCCG
CCGACAACGAATTCACCCTCGATACCGAGGCTGCTGAAGAGCCGGCGTTGTCCCTGCCGGACGACTTCGACCTGTCGCTG
GCCGACGAGCCGGCGGAGCCGGCCGCCCCGGCAAAGAGCGAGGATAGTTTCGCCGCCCAGTTGGATGAGGTGAGTGCGCA
GTTGGACGAGTTGGCCAGCAACCTTGACGAGCCGAAGAGCGCGGCGCCGAGTTTCTCCGCCGAGGATGCAGCGGTCGCCT
CCGCACTGGACGGAGACGCCGACGATGACTTCGACTTCCTCTCCGGTGCCGACGAAGCAGCGACCAAGCTGGATCTGGCT
CGCGCCTACATCGACATGGGCGATAGCGAAGGCGCGCGCGATATCCTCGACGAAGTCCTGGCCGAAGGTAACGACAGCCA
GCAGGCGGAAGCCCGCGAGTTGCTGGAGCGCCTGGCCTGA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
fimV	Pseudomonas aeruginosa PAK	98.694	100	0.987