Detailed information NTG0876311

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: WGQ50_RS05430
• Genome accession: NZ_CP149884
• Coordinates: 1054843..1055793 (+)
• Length: 316 a.a.
• NCBI ID: WP_060786056.1
• Uniprot ID: -
• Organism: Campylobacter coli strain NPRC(S) 01.13898
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1049843..1060793

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WGQ50_RS05405 (WGQ50_05405)	-	1049854..1051053 (-)	1200	WP_060785329.1	glycosyltransferase family 8 protein	-
WGQ50_RS05410 (WGQ50_05410)	-	1051181..1052485 (+)	1305	WP_052783333.1	hypothetical protein	-
WGQ50_RS05415 (WGQ50_05415)	-	1052482..1053531 (+)	1050	WP_002804034.1	asparagine synthase C-terminal domain-containing protein	-
WGQ50_RS05420 (WGQ50_05420)	-	1053534..1053950 (+)	417	WP_002796922.1	adenylyltransferase/cytidyltransferase family protein	-
WGQ50_RS05425 (WGQ50_05425)	-	1053969..1054784 (-)	816	WP_339078930.1	glycosyltransferase family 2 protein	-
WGQ50_RS05430 (WGQ50_05430)	waaF	1054843..1055793 (+)	951	WP_060786056.1	glycosyltransferase family 9 protein	Regulator
WGQ50_RS05435 (WGQ50_05435)	-	1055779..1056543 (-)	765	WP_002825331.1	glycosyltransferase family 25 protein	-
WGQ50_RS05440 (WGQ50_05440)	gmhA	1056543..1057103 (-)	561	WP_041160152.1	D-sedoheptulose 7-phosphate isomerase	-
WGQ50_RS05445 (WGQ50_05445)	rfaE1	1057100..1058485 (-)	1386	WP_057032643.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
WGQ50_RS05450 (WGQ50_05450)	rfaD	1058478..1059431 (-)	954	WP_044600825.1	ADP-glyceromanno-heptose 6-epimerase	-
WGQ50_RS05455 (WGQ50_05455)	-	1059432..1059950 (-)	519	WP_141043521.1	HAD family hydrolase	-
WGQ50_RS05460 (WGQ50_05460)	-	1060069..1060368 (+)	300	WP_002777238.1	cytochrome c	-
WGQ50_RS05465 (WGQ50_05465)	-	1060398..1060598 (-)	201	WP_002777240.1	cbb3-type cytochrome oxidase assembly protein	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36356.87 Da
• Isoelectric Point: 10.3316

>NTDB_id=876311 WGQ50_RS05430 WP_060786056.1 1054843..1055793(+) (waaF) [Campylobacter coli strain NPRC(S) 01.13898]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFSNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGTGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVIVKAIQNLINI

Nucleotide

• Length: 951 bp

>NTDB_id=876311 WGQ50_RS05430 WP_060786056.1 1054843..1055793(+) (waaF) [Campylobacter coli strain NPRC(S) 01.13898]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTTCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGCAAAATCGATTTTAGCTTTGCT
TTTAGGTCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAGCAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCACAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAGTGATTGTAAAAGCGATTCAAAATTTAATTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.357	99.367	0.918