Detailed information NTG0876294

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: WGQ50_RS01560
• Genome accession: NZ_CP149884
• Coordinates: 297498..300320 (-)
• Length: 940 a.a.
• NCBI ID: WP_002793466.1
• Uniprot ID: -
• Organism: Campylobacter coli strain NPRC(S) 01.13898
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 292498..305320

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WGQ50_RS01535 (WGQ50_01535)	polA	292522..295161 (-)	2640	WP_002780668.1	DNA polymerase I	-
WGQ50_RS01540 (WGQ50_01540)	-	295225..295668 (-)	444	WP_002778224.1	YqaA family protein	-
WGQ50_RS01545 (WGQ50_01545)	-	295661..296251 (-)	591	WP_002824730.1	hypothetical protein	-
WGQ50_RS01550 (WGQ50_01550)	-	296264..296941 (-)	678	WP_002778226.1	hypothetical protein	-
WGQ50_RS01555 (WGQ50_01555)	-	296957..297496 (-)	540	WP_052780189.1	hypothetical protein	-
WGQ50_RS01560 (WGQ50_01560)	uvrA	297498..300320 (-)	2823	WP_002793466.1	excinuclease ABC subunit UvrA	Machinery gene
WGQ50_RS01565 (WGQ50_01565)	-	300408..301193 (-)	786	WP_002778230.1	sulfite exporter TauE/SafE family protein	-
WGQ50_RS01570 (WGQ50_01570)	-	301577..302818 (+)	1242	WP_002778232.1	anthranilate synthase component I family protein	-
WGQ50_RS01575 (WGQ50_01575)	trpD	302820..304412 (+)	1593	WP_002778234.1	anthranilate phosphoribosyltransferase	-
WGQ50_RS01580 (WGQ50_01580)	-	304399..304998 (+)	600	WP_002778236.1	phosphoribosylanthranilate isomerase	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 105094.32 Da
• Isoelectric Point: 8.4459

>NTDB_id=876294 WGQ50_RS01560 WP_002793466.1 297498..300320(-) (uvrA) [Campylobacter coli strain NPRC(S) 01.13898]
MNDTIKIIGAKENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFGTLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGL
TPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIQHCHQCGQKISSMSASDIVGEILKFPKGAKIIIYAPLVREKK
GTYADLLENLRNKGYVRAQIDGVLVRLDEDIELSKTKKHTIKLVIDRLEIQEDLLSRLASDIEKGLEESFGEIEIEVLNP
DEVGLNKHYHFSEHSACFACKISFVPLEPLSFSFNSPKGACEACDGLGIRYTLDMKKIIDESLSLENGAVKIMYGFNKSY
YYKFLIAFCEQNEIPIKLPFAELSEEQKRLVLYGNAKTIDFFWKRNRLKRTFEGVVKMAYEMLKDEKDLAEYMSEKICKD
CAGHRLKPESLAVKVASKGLGEILDMSIEDSTSFFANKKNFSYLSEQERLISEPILKEINERLFFLYDVGLGYLSLGRDA
RTISGGEAQRIRIASQIGSGLSGVMYVLDEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKA
GKFGGEVVFAGTYKELLKSKSETALYMNGKKQISQLQNREQKEWLELKNVNINNIKDLSVSFPLQNLVAITGVSGSGKSS
LILQTLLPFAQEELNRAKKVKKLGGVQIEGLEKLDKVIYLDQSPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKV
GRFSFNVKGGRCEKCSGDGEIKIEMHFLPDVMVVCDTCHGKRYNDATLEIKYKGKNISEILNMSVLEASEFFAAVPKIKQ
KLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLHFEDVNKLILVLQHLVDLKNSVFVI
EHNLDVIKNADYIIDMGPEGGVKGGKIISTGSVEKVAKDHKKTKSYTGYYLDLELKNAKS

Nucleotide

• Length: 2823 bp

>NTDB_id=876294 WGQ50_RS01560 WP_002793466.1 297498..300320(-) (uvrA) [Campylobacter coli strain NPRC(S) 01.13898]
ATGAATGATACGATAAAAATCATTGGCGCAAAGGAAAATAATCTTAAAAATATTCATCTTGAAATTCCAAAAAATAAACT
CATTGTTTTTACAGGATTAAGCGGTAGTGGAAAATCAACCCTTGCTTTTGGCACACTCTATGCCGAAGGTCAACGCCGTT
ATATAGAAAGTTTGAGTGCTTATGCAAGACAATTTTTAGACAAGGTAGGCAAACCCGATGTGGATAAAATCGAAGGTTTA
ACCCCTGCTATTGCGATTGATCAAAAAACCACTTCTAAAAATCCGCGTTCTACAGTCGGAACCATCACTGAAATTTATGA
TTATTTAAGACTTTTATATGCAAGAGTGGGCATTCAGCATTGCCATCAATGCGGACAAAAAATCTCATCTATGAGTGCAA
GTGATATAGTAGGAGAAATTTTAAAATTTCCAAAAGGAGCTAAAATCATCATCTACGCTCCTTTGGTGCGTGAAAAAAAA
GGAACTTATGCGGATTTACTTGAAAATTTGCGCAATAAAGGCTATGTAAGAGCGCAAATTGATGGGGTTTTAGTAAGACT
TGATGAAGATATAGAACTTTCAAAAACTAAAAAACATACGATAAAACTCGTCATTGATAGACTCGAAATACAAGAAGATC
TACTTTCTCGCCTTGCAAGCGATATAGAAAAAGGTTTGGAAGAAAGCTTTGGAGAAATCGAGATAGAAGTCTTAAATCCC
GATGAAGTAGGACTTAATAAGCACTATCACTTTAGCGAACACTCCGCTTGCTTTGCTTGTAAAATTTCCTTTGTTCCTCT
TGAGCCTTTAAGTTTTTCTTTTAACTCTCCAAAAGGGGCTTGTGAAGCCTGTGATGGACTTGGAATTCGCTATACCCTAG
ATATGAAAAAAATCATCGATGAAAGCCTAAGTCTTGAAAATGGCGCGGTAAAAATAATGTATGGATTTAACAAAAGCTAT
TATTATAAATTTTTAATTGCTTTTTGCGAGCAAAATGAAATTCCTATTAAACTCCCTTTTGCTGAACTTAGCGAAGAACA
AAAACGCCTTGTGCTATACGGAAATGCAAAAACCATTGACTTTTTTTGGAAAAGAAATCGCCTCAAACGCACCTTTGAAG
GTGTGGTAAAAATGGCTTATGAAATGCTAAAAGATGAAAAAGACTTAGCAGAATACATGAGTGAAAAAATTTGCAAAGAT
TGTGCAGGTCATCGTTTAAAACCTGAAAGTTTAGCCGTAAAAGTAGCCTCTAAAGGACTAGGCGAAATTTTAGATATGAG
TATAGAAGATAGCACTAGCTTTTTTGCAAATAAGAAAAATTTCTCTTATTTAAGCGAGCAAGAAAGACTTATCTCTGAAC
CCATATTAAAAGAAATCAACGAAAGACTTTTCTTTTTATATGATGTAGGACTAGGCTATTTATCTTTAGGACGCGATGCA
AGGACGATTAGCGGAGGTGAGGCACAAAGAATTCGCATCGCTTCACAAATTGGCAGTGGTTTAAGTGGGGTGATGTATGT
TTTAGATGAACCTAGTATCGGACTTCATGAAAGAGATACAGCAAAACTCATTAAAACCTTAAGAAATTTACAACAAAAAG
GCAATACTCTAATTGTCGTAGAGCACGATAAAATGACTATAGAAGAAGCTGATTTTATCGTAGATATTGGCCCAAAAGCA
GGAAAATTTGGAGGCGAAGTGGTATTTGCTGGAACTTATAAAGAACTTTTAAAAAGCAAAAGTGAAACCGCACTTTATAT
GAACGGCAAGAAGCAAATTTCACAGCTTCAAAACAGAGAACAAAAAGAATGGCTAGAACTTAAAAATGTAAATATCAATA
ATATCAAAGATCTAAGCGTTTCTTTTCCTTTGCAAAATTTAGTCGCGATCACAGGTGTTTCAGGATCTGGAAAAAGCTCT
CTCATACTTCAAACCTTACTGCCTTTTGCACAAGAAGAATTAAACCGCGCCAAAAAAGTAAAGAAATTAGGTGGGGTGCA
GATTGAAGGGCTTGAAAAACTAGATAAGGTTATTTATCTTGATCAAAGTCCTATAGGACGAACCCCGCGATCAAATCCTG
CTACCTATACAGGTGCCATGGATGAAATTCGCAATCTTTTTGCTGCTACCAAAGAAGCTAAAATGCGAGGCTATAAAGTG
GGGCGTTTTTCTTTTAATGTTAAGGGTGGAAGATGTGAGAAATGCAGTGGCGATGGAGAGATTAAAATAGAAATGCACTT
CTTGCCCGATGTAATGGTGGTTTGCGATACTTGCCATGGCAAACGCTATAATGATGCCACACTAGAGATTAAATACAAAG
GTAAAAATATCAGTGAAATTTTAAATATGAGCGTTTTAGAAGCAAGTGAATTTTTTGCAGCTGTGCCAAAAATCAAACAA
AAACTTGATACCTTAGTAAAAGTCGGACTTGATTATCTTACCCTAGGACAAAATGCAACGACTTTAAGTGGGGGTGAAGC
GCAAAGGATAAAACTTGCAAAAGAATTAAGCCGCAGTGACACAGGAAAAACGCTTTACATACTTGATGAGCCGACCACAG
GGCTACATTTTGAAGATGTCAATAAACTCATTTTAGTTTTACAACACTTAGTCGATCTTAAAAATTCTGTTTTTGTGATA
GAGCATAATTTAGATGTGATTAAAAATGCTGATTATATCATCGATATGGGTCCAGAAGGCGGAGTAAAGGGTGGAAAAAT
CATTAGTACAGGAAGCGTGGAAAAAGTTGCAAAAGATCATAAGAAAACAAAATCTTATACAGGATATTATTTGGATTTAG
AGCTTAAAAACGCAAAGAGTTAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (616-852)

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-386)

• UvrA interaction domain (UvrA_inter) (132-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	52.471	100	0.531
uvrA	Streptococcus pneumoniae TIGR4	52.471	100	0.531
uvrA	Streptococcus pneumoniae D39	52.471	100	0.531