Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   WKU69_RS18395 Genome accession   NZ_CP149838
Coordinates   3776116..3778950 (+) Length   944 a.a.
NCBI ID   WP_000083355.1    Uniprot ID   A0A0D8FGA4
Organism   Acinetobacter baumannii strain 2024CK-00130     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3771116..3783950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKU69_RS18365 (WKU69_18365) - 3771354..3772436 (-) 1083 WP_000680213.1 DUF475 domain-containing protein -
  WKU69_RS18370 (WKU69_18370) tenA 3772699..3773373 (+) 675 WP_000899418.1 thiaminase II -
  WKU69_RS18375 (WKU69_18375) - 3773423..3773764 (-) 342 WP_000263324.1 GlpM family protein -
  WKU69_RS18380 (WKU69_18380) - 3773817..3774170 (-) 354 WP_000901439.1 DUF1304 domain-containing protein -
  WKU69_RS18385 (WKU69_18385) - 3774236..3775213 (-) 978 WP_001256586.1 zinc-binding dehydrogenase -
  WKU69_RS18390 (WKU69_18390) - 3775217..3775819 (-) 603 WP_000826320.1 TetR/AcrR family transcriptional regulator -
  WKU69_RS18395 (WKU69_18395) uvrA 3776116..3778950 (+) 2835 WP_000083355.1 excinuclease ABC subunit UvrA Machinery gene
  WKU69_RS18400 (WKU69_18400) - 3778984..3780690 (-) 1707 WP_000016113.1 GGDEF domain-containing protein -
  WKU69_RS18405 (WKU69_18405) omp33-36 3781682..3782581 (+) 900 WP_000733008.1 porin Omp33-36 -

Sequence

Protein


Download         Length: 944 a.a.        Molecular weight: 104386.69 Da        Isoelectric Point: 6.5117

>NTDB_id=876098 WKU69_RS18395 WP_000083355.1 3776116..3778950(+) (uvrA) [Acinetobacter baumannii strain 2024CK-00130]
MSQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSQMEKPEVDSIEG
LSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPYCPEHDLPMVAQTVSEMVDAVKNLEEGTALMLLAPVVRER
KGEYSNLFEQLQGQGFVRARVDGEIIDIDTPPELDKKKKHTIEVVVDRFKVRDDLGNRIAESFETALRLGGDIAVLSWMN
GEHPDRVFSAKHSCPECDRAVAELEPRLFSFNNPFGACPVCDGLGTRSHFSPEKLIPNPELAISEGAIRGWDRQRPYYYS
MLQKVADHFGFQLDTPWNQLDKDTQKKFLQGTGKEKIDLSYIDERGRKHTRVQPFEGILPHLERRYRETESNYVRDDLAQ
YLSNAACDACGGSRLNEISRHVRVKDKTIADITRMSIGDAESYYQGINLEGAKGEIADKIFKEIRERLHFLVSVGLNYLS
LARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGNTVLVVEHDEDAIRAADHIID
IGPGAGVHGGVVIAEGTYDELAKHADSLTGQYLSGKLKIEVPKQRTQPPKPEEKIKLSGAAGHNLKNVDLTIPLGIMTCV
TGVSGSGKSTLINRTLLPLAATQLNGATTLTAEKFDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT
PEAKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEVGYKGKNISDVLEMTVEDAAE
FFSAIPVIHRRLETLTQVGLGYIRLGQAATTLSGGEAQRVKLARELAKRDTGKTLYILDEPTTGLHFHDIAKLLDILHEL
RNKGNTIVVIEHNLDVIKTADWVVDLGPEGGSGGGMIIAEGTPEQVAEVEISHTGRFLKPMLKQ

Nucleotide


Download         Length: 2835 bp        

>NTDB_id=876098 WKU69_RS18395 WP_000083355.1 3776116..3778950(+) (uvrA) [Acinetobacter baumannii strain 2024CK-00130]
ATGAGCCAAAGTCATATCCGTATTCGAGGCGCACGCACCCATAACTTAAAAAATGTGTCACTCGATATTCCACGCGACAA
ATTTGTGGTAATTACGGGGCTATCAGGTTCAGGAAAATCTTCTCTTGCCTTTGATACCTTGTATGCCGAAGGGCAGCGCC
GTTATGTCGAATCACTTTCGGCATATGCCCGCCAGTTCTTATCGCAAATGGAAAAACCTGAAGTTGACTCGATTGAAGGT
TTATCACCAGCCATTGCGATTGAGCAAAAGTCTACTAGCCATAACCCACGTTCAACGGTTGGTACGATTACCGAAATTTA
TGACTATTTGCGTCTGCTTTATGCACGTGTCGGTACGCCTTATTGCCCTGAACACGACTTACCTATGGTTGCGCAAACTG
TTTCTGAAATGGTCGATGCGGTAAAAAACCTTGAGGAAGGTACAGCACTTATGTTGCTTGCCCCTGTTGTTCGTGAGCGT
AAAGGTGAATACAGCAACTTGTTCGAACAACTACAAGGTCAAGGTTTCGTTCGTGCCCGTGTTGATGGTGAAATCATTGA
TATTGATACACCACCGGAACTCGACAAAAAGAAAAAACATACCATTGAAGTCGTTGTTGACCGCTTTAAAGTACGTGATG
ATTTAGGCAACCGTATTGCTGAATCATTTGAAACCGCACTGCGTTTAGGTGGTGATATTGCAGTTTTATCGTGGATGAAT
GGCGAACACCCTGATCGCGTCTTTTCTGCAAAGCACTCATGCCCTGAATGTGATCGCGCAGTCGCAGAGCTTGAGCCACG
TTTATTTTCATTTAACAACCCGTTTGGTGCGTGCCCTGTCTGTGATGGCTTAGGTACACGTAGCCATTTTAGCCCTGAAA
AACTCATTCCTAACCCTGAACTTGCAATTAGTGAAGGTGCTATTCGTGGTTGGGATCGTCAACGTCCTTATTACTATTCA
ATGCTGCAAAAAGTTGCCGACCATTTTGGTTTTCAACTTGATACACCTTGGAATCAGTTAGATAAAGACACGCAAAAGAA
ATTCTTACAAGGTACTGGCAAAGAAAAAATCGATTTAAGTTATATCGATGAACGCGGCCGTAAACATACACGCGTGCAAC
CTTTTGAAGGAATTTTGCCACACCTTGAACGTCGCTATCGTGAAACTGAAAGTAACTATGTACGTGATGATTTAGCACAA
TATTTGTCTAATGCAGCTTGTGATGCATGTGGCGGTTCACGTCTCAATGAAATTTCACGTCATGTTCGTGTAAAAGACAA
AACCATTGCCGACATTACTCGCATGTCGATTGGAGATGCCGAAAGTTACTATCAAGGTATAAACCTTGAAGGTGCCAAAG
GTGAAATTGCAGATAAAATCTTTAAAGAGATTCGTGAGCGTTTACATTTCTTAGTGAGTGTTGGCCTGAACTATTTAAGT
CTGGCTCGTTCTGCCGAAACACTATCGGGTGGTGAAGCCCAGCGTATCCGTCTAGCTTCGCAAATTGGTGCAGGTTTGAT
GGGTGTCATGTACGTCCTTGATGAACCATCAATTGGTCTCCATCAACGTGATAATGATCGTTTATTACAAACGCTAATTC
GCTTACGTGATTTGGGCAATACGGTATTAGTCGTTGAACATGATGAAGATGCAATCCGTGCAGCTGACCATATTATTGAT
ATCGGCCCTGGTGCTGGCGTGCATGGTGGTGTTGTCATTGCTGAAGGTACGTATGATGAGCTGGCTAAACATGCCGACTC
GCTCACAGGTCAATATCTTTCAGGCAAACTCAAAATTGAAGTGCCAAAACAGCGAACTCAACCACCTAAACCTGAAGAAA
AAATTAAACTTTCAGGTGCAGCGGGTCATAACTTAAAAAATGTCGATTTAACCATCCCACTTGGCATTATGACTTGTGTC
ACGGGTGTTTCAGGTTCAGGTAAATCAACACTGATTAACCGTACGTTACTCCCACTGGCTGCAACACAACTTAATGGTGC
AACGACCTTAACAGCTGAAAAGTTTGATTCAATTGATGGTCTTCAACATTTAGATAAAGTCGTTGATATTGACCAAAGCC
CAATTGGCCGTACACCGCGCTCTAACCCAGCGACCTATACGGGACTATTTACACCAATTCGTGAATTATTTGCTCAAACC
CCAGAGGCTAAAGCGCGTGGTTATAGTGCGGGTCGTTTCTCGTTTAACGTAAAAGGCGGACGCTGCGAAGCGTGTGAAGG
CGACGGTATGATTAAAGTCGCAATGCACTTCTTACCAGACATGTATGTACCTTGCGATGCATGTCATGGCAAACGTTATA
ACCGTGAAACACTTGAAGTCGGTTATAAAGGCAAAAACATTTCTGATGTTTTAGAAATGACGGTTGAAGATGCTGCTGAG
TTCTTTAGTGCTATTCCAGTTATTCACCGCCGCTTAGAAACCTTAACTCAGGTTGGCTTAGGCTATATTCGTTTAGGTCA
GGCGGCTACTACTTTATCTGGTGGTGAAGCACAGCGTGTCAAACTGGCTCGTGAGTTAGCGAAACGTGATACGGGTAAAA
CGCTTTATATCTTGGATGAACCAACAACAGGTCTGCATTTTCATGATATTGCCAAGTTACTCGATATTTTGCATGAGCTA
CGCAACAAGGGTAATACCATTGTGGTAATTGAACATAACCTTGATGTCATTAAAACAGCAGACTGGGTTGTCGACTTAGG
CCCTGAAGGTGGTTCGGGCGGTGGTATGATCATTGCCGAAGGTACACCTGAACAAGTGGCTGAGGTTGAAATTTCCCATA
CGGGTCGTTTCTTGAAACCGATGTTGAAACAATAA

Domains

Predicted by InterProScan.

UvrA DNA-binding domain (UvrA_DNA-bind)

(292-399)

UvrA interaction domain (UvrA_inter)

(132-237)

ABC transporter (ABC_tran)

(625-862)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D8FGA4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

56.25

100

0.563
  uvrA Streptococcus pneumoniae TIGR4

56.25

100

0.563
  uvrA Streptococcus pneumoniae D39

56.25

100

0.563