Detailed information    

insolico Bioinformatically predicted

Overview

Name   exbB   Type   Machinery gene
Locus tag   WKU69_RS08700 Genome accession   NZ_CP149838
Coordinates   1789080..1789715 (+) Length   211 a.a.
NCBI ID   WP_000264036.1    Uniprot ID   A0A7U3Y6I5
Organism   Acinetobacter baumannii strain 2024CK-00130     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1784080..1794715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKU69_RS08675 (WKU69_08675) - 1784920..1785933 (+) 1014 WP_001096106.1 phosphotransferase -
  WKU69_RS08680 (WKU69_08680) murU 1785933..1786622 (+) 690 WP_000646457.1 N-acetylmuramate alpha-1-phosphate uridylyltransferase MurU -
  WKU69_RS08685 (WKU69_08685) rsmG 1786710..1787342 (+) 633 WP_000553197.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -
  WKU69_RS08690 (WKU69_08690) - 1787364..1788146 (+) 783 WP_339243414.1 ParA family protein -
  WKU69_RS08695 (WKU69_08695) - 1788143..1789030 (+) 888 WP_000023429.1 ParB/RepB/Spo0J family partition protein -
  WKU69_RS08700 (WKU69_08700) exbB 1789080..1789715 (+) 636 WP_000264036.1 MotA/TolQ/ExbB proton channel family protein Machinery gene
  WKU69_RS08705 (WKU69_08705) - 1789731..1790159 (+) 429 WP_000669684.1 biopolymer transporter ExbD -
  WKU69_RS08710 (WKU69_08710) msbA 1790156..1791883 (+) 1728 WP_001070729.1 lipid A export permease/ATP-binding protein MsbA -
  WKU69_RS08715 (WKU69_08715) lpxK 1791886..1792896 (+) 1011 WP_000050469.1 tetraacyldisaccharide 4'-kinase -
  WKU69_RS08720 (WKU69_08720) kdsB 1792906..1793667 (+) 762 WP_000680698.1 3-deoxy-manno-octulosonate cytidylyltransferase -
  WKU69_RS08725 (WKU69_08725) - 1793679..1794659 (+) 981 WP_001075417.1 DNA polymerase III subunit delta' -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23212.13 Da        Isoelectric Point: 6.4861

>NTDB_id=876057 WKU69_RS08700 WP_000264036.1 1789080..1789715(+) (exbB) [Acinetobacter baumannii strain 2024CK-00130]
MWELVKAGGWLMLPLILCSILTVAISIERFVRLRRSQVLPKVLMNDGSADISVVITNLEQDTNAQSTALGNILKAGFEHQ
EHGEQFARAQMEAMASQEISYLEKNINFLGTLSAIAPLLGLLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVG
MLIAIPALISYRYFQRVVQDYIAELEQQSTLFHASLFYKRSSIMQEHRRVG

Nucleotide


Download         Length: 636 bp        

>NTDB_id=876057 WKU69_RS08700 WP_000264036.1 1789080..1789715(+) (exbB) [Acinetobacter baumannii strain 2024CK-00130]
ATGTGGGAACTTGTGAAAGCGGGCGGCTGGTTAATGCTGCCTTTAATTTTGTGTTCAATTTTAACCGTCGCAATTAGTAT
TGAGCGTTTTGTACGTTTAAGACGTTCACAAGTTTTACCTAAAGTACTAATGAATGATGGCAGTGCAGATATTTCTGTTG
TCATAACAAATTTGGAACAGGATACTAATGCGCAAAGCACGGCATTGGGCAATATTCTAAAAGCTGGTTTTGAGCATCAG
GAACATGGCGAACAATTTGCTCGAGCACAAATGGAAGCTATGGCTTCTCAAGAAATCTCTTATTTAGAAAAAAATATTAA
CTTCTTAGGGACCTTAAGTGCTATAGCGCCTCTACTAGGGCTGCTTGGAACAGTTGTGGGAATTATTGAGTCTTTTTTGG
TTATTGATTTTGGTTCGGCAGGTAGTCCTAGTTTAATGATTCCCGGTATTTCCAAGGCTTTGATCACAACAGCAGTTGGT
ATGCTCATTGCAATTCCTGCACTTATTTCCTATCGATATTTTCAAAGAGTAGTGCAAGATTATATTGCTGAGTTAGAGCA
ACAATCGACGCTATTTCATGCCTCATTGTTTTACAAACGTTCTTCAATCATGCAAGAACATCGCCGCGTTGGTTGA

Domains

Predicted by InterProScan.

MotA/TolQ/ExbB proton channel family (MotA_ExbB)

(67-186)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U3Y6I5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  exbB Pseudomonas stutzeri DSM 10701

43.455

90.521

0.393