Detailed information NTG0876046

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: WKU69_RS03170
• Genome accession: NZ_CP149838
• Coordinates: 675863..677311 (+)
• Length: 482 a.a.
• NCBI ID: WP_000778203.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain 2024CK-00130
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 670863..682311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKU69_RS03170 (WKU69_03170)	rpoN/rpoN1	675863..677311 (+)	1449	WP_000778203.1	RNA polymerase factor sigma-54	Machinery gene
WKU69_RS03175 (WKU69_03175)	raiA	677480..677818 (+)	339	WP_339243019.1	ribosome-associated translation inhibitor RaiA	-
WKU69_RS03180 (WKU69_03180)	ibaG	677957..678208 (+)	252	WP_001083680.1	BolA family iron metabolism protein IbaG	-
WKU69_RS03185 (WKU69_03185)	murA	678215..679471 (+)	1257	WP_339243022.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
WKU69_RS03190 (WKU69_03190)	hisG	679471..680154 (+)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
WKU69_RS03195 (WKU69_03195)	hisD	680260..681549 (+)	1290	WP_001253724.1	histidinol dehydrogenase	-

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55112.99 Da
• Isoelectric Point: 4.6620

>NTDB_id=876046 WKU69_RS03170 WP_000778203.1 675863..677311(+) (rpoN/rpoN1) [Acinetobacter baumannii strain 2024CK-00130]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLSTLEHKETDDLTTELNADHLP
DDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKEHILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEII
LAVQHLLSEMDIDEEVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTTGGEASSTAIRAMIKKLVSNENPRKPLSDNTIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=876046 WKU69_RS03170 WP_000778203.1 675863..677311(+) (rpoN/rpoN1) [Acinetobacter baumannii strain 2024CK-00130]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAATTCATTATCGTTAACGCCTCAATTGCAGCAGGCAATCCGTTTACTACA
ACTTTCTAGCCTAGAGTTAGAGCAAGAAATCCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTAGAAGATGAAT
CACTAGCAGAAAGTTTATCTACTTTAGAACACAAAGAAACGGATGATCTTACAACAGAGTTGAATGCTGATCACTTACCT
GATGACTTGCCTGTTGATACTGAATGGGATGACATTTATACACATCAATCCACTGCTTTGGGTACTCCTGAGTTCGAAGA
GCGTGAAGATAATCGCCAAGTTCACCTGACGCTTAAAGAACATATTTTGGAGCAAGTGAACTTACTGCATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGCATAGTTGATGCTTTAGATGATAAAGGTTTTCTGGATGCTGAATTAGAAGAGATTATT
TTGGCAGTACAGCATTTATTAAGTGAGATGGATATAGATGAGGAAGTGGAAGAGGACGAAGTTTTAGTAGTCTTAAAACA
TATTCAACGTCTTGATCCAATTGGTATTGGAGCTCGTAATTTAGCTGAATGTTTAAAAGTTCAGTTGGAGTTCTTGCCTA
GAGAAACTGAATATTTGAAAGAAGCTAGAAGTCTACTTCAATATTACGAATTACTGATTGCGAATGATCTTAATAAATTA
TTGAAGCAAACAGGGCTTTCCAAGGAACAATTAAAATTTGCAGTTGATTTATTAAAAACATTAAAGCCTTATCCAGGCAT
GGATTTTGAAAAGCAAGAATCAGAGTATCAAATTCCTGACGTAGTCGTTGCCAAGAAGGACTTGCATTGGCAAGTTCAGT
TAAACCCTGATGTAATGCCAAAATTAAGAATCAATTCTTTTTATTCGAGTATGATTCGTAGGGCAGATCAAAGTGATGAT
AATTTATACCTACGTAATCAAATGCTTGAGGCTAAAAATTTTATAAAAAGTATTGATGAACGGCACAAAACATTATTAAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCCGAAGCAATGAAACCCTTAGTACTAAGGG
ATGTTGCAGAAGAAGTAGAATTACATGAGTCGACCGTTTCTCGCGTTACCACAAATAAGTATATGCTTACTCCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCATGTGGGGACAACCACCGGAGGTGAGGCTTCTTCTACCGCAATTCGGGC
GATGATTAAAAAGTTAGTTTCTAATGAAAATCCGCGTAAACCTTTGTCTGATAATACAATTGCTGCTTTATTGAAAGAAG
AGGGAATAGAAGTAGCTAGAAGGACTGTAGCAAAATATAGAGAATCGTTACATATTCCATCGTCATCCGAGAGAAAAGTC
TTGATCTAA

Domains

Predicted by InterProScan.

• Sigma-54 factor, core binding domain (Sigma54_CBD) (111-308)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	43.333	100	0.459