Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | TOL5_RS11810 | Genome accession | NZ_AP024708 |
| Coordinates | 2512668..2513051 (-) | Length | 127 a.a. |
| NCBI ID | WP_009586653.1 | Uniprot ID | - |
| Organism | Acinetobacter sp. Tol 5 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2507668..2518051
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TOL5_RS11780 (TOL5_23100) | tadA | 2507789..2508313 (-) | 525 | WP_009586640.1 | tRNA adenosine(34) deaminase TadA | - |
| TOL5_RS11785 (TOL5_23110) | - | 2508320..2509441 (-) | 1122 | WP_221260349.1 | enoyl-CoA hydratase/isomerase family protein | - |
| TOL5_RS11790 (TOL5_23120) | ung | 2509438..2510151 (-) | 714 | WP_004830983.1 | uracil-DNA glycosylase | - |
| TOL5_RS11795 (TOL5_23130) | - | 2510226..2510822 (-) | 597 | WP_005029250.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| TOL5_RS11800 (TOL5_23140) | gspK | 2511048..2512019 (-) | 972 | WP_004830985.1 | type II secretion system minor pseudopilin GspK | - |
| TOL5_RS11805 (TOL5_23150) | xcpW | 2512012..2512665 (-) | 654 | WP_005029252.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| TOL5_RS11810 (TOL5_23160) | xcpV | 2512668..2513051 (-) | 384 | WP_009586653.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| TOL5_RS11815 (TOL5_23170) | - | 2513038..2513604 (-) | 567 | WP_009586651.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| TOL5_RS11820 (TOL5_23180) | - | 2513610..2514224 (-) | 615 | WP_004830990.1 | TetR/AcrR family transcriptional regulator | - |
| TOL5_RS11825 (TOL5_23190) | - | 2514309..2515082 (-) | 774 | WP_049044701.1 | TatD family hydrolase | - |
| TOL5_RS11830 (TOL5_23200) | - | 2515110..2515451 (-) | 342 | WP_004830992.1 | PilZ domain-containing protein | - |
| TOL5_RS11835 (TOL5_23210) | - | 2515478..2516458 (-) | 981 | WP_151780769.1 | DNA polymerase III subunit delta' | - |
| TOL5_RS11840 (TOL5_23220) | kdsB | 2516496..2517257 (-) | 762 | WP_121775060.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14065.35 Da Isoelectric Point: 9.7757
>NTDB_id=87590 TOL5_RS11810 WP_009586653.1 2512668..2513051(-) (xcpV) [Acinetobacter sp. Tol 5]
MKKNKGFTLIEVVVALAIFAVAAIALTKVAMQYTQSTANAILRTKAQFVAQNEISMMMINREWLTGTASKQITAQGETWQ
VDKKAESTLSPDVQKIDVQVSLFNTDTGKVEAGITNMVFYNYPIKEK
MKKNKGFTLIEVVVALAIFAVAAIALTKVAMQYTQSTANAILRTKAQFVAQNEISMMMINREWLTGTASKQITAQGETWQ
VDKKAESTLSPDVQKIDVQVSLFNTDTGKVEAGITNMVFYNYPIKEK
Nucleotide
Download Length: 384 bp
>NTDB_id=87590 TOL5_RS11810 WP_009586653.1 2512668..2513051(-) (xcpV) [Acinetobacter sp. Tol 5]
ATGAAGAAAAATAAAGGCTTTACCCTTATCGAAGTGGTCGTGGCATTGGCGATCTTTGCTGTTGCAGCAATAGCTTTGAC
TAAAGTTGCGATGCAATATACCCAATCTACAGCCAATGCCATTTTACGGACCAAAGCACAATTTGTTGCACAAAATGAAA
TTTCAATGATGATGATTAACCGAGAGTGGTTAACTGGAACAGCTTCAAAACAGATCACGGCTCAAGGTGAAACATGGCAA
GTGGATAAAAAAGCAGAGTCTACACTGAGTCCTGATGTGCAAAAAATCGATGTGCAGGTCAGTTTATTTAATACTGATAC
AGGTAAAGTGGAAGCAGGAATCACCAATATGGTGTTTTATAATTATCCAATCAAAGAAAAATAG
ATGAAGAAAAATAAAGGCTTTACCCTTATCGAAGTGGTCGTGGCATTGGCGATCTTTGCTGTTGCAGCAATAGCTTTGAC
TAAAGTTGCGATGCAATATACCCAATCTACAGCCAATGCCATTTTACGGACCAAAGCACAATTTGTTGCACAAAATGAAA
TTTCAATGATGATGATTAACCGAGAGTGGTTAACTGGAACAGCTTCAAAACAGATCACGGCTCAAGGTGAAACATGGCAA
GTGGATAAAAAAGCAGAGTCTACACTGAGTCCTGATGTGCAAAAAATCGATGTGCAGGTCAGTTTATTTAATACTGATAC
AGGTAAAGTGGAAGCAGGAATCACCAATATGGTGTTTTATAATTATCCAATCAAAGAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
76 |
98.425 |
0.748 |