Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   RFN66_RS07200 Genome accession   NZ_CP133705
Coordinates   1383543..1384496 (+) Length   317 a.a.
NCBI ID   WP_020450927.1    Uniprot ID   A0A6N2FML9
Organism   Bacillus paralicheniformis strain CP47     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1378543..1389496
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RFN66_RS07170 (RFN66_07170) argF 1379410..1380360 (+) 951 WP_020450924.1 ornithine carbamoyltransferase -
  RFN66_RS07175 (RFN66_07175) - 1380398..1381210 (-) 813 WP_020450925.1 undecaprenyl-diphosphate phosphatase -
  RFN66_RS07180 (RFN66_07180) - 1381392..1381571 (+) 180 WP_003180573.1 YjzC family protein -
  RFN66_RS07185 (RFN66_07185) - 1381635..1381829 (-) 195 WP_009328851.1 YjzD family protein -
  RFN66_RS07190 (RFN66_07190) - 1382061..1382795 (+) 735 WP_020450926.1 hypothetical protein -
  RFN66_RS07195 (RFN66_07195) - 1382882..1383457 (+) 576 WP_105980873.1 hypothetical protein -
  RFN66_RS07200 (RFN66_07200) med 1383543..1384496 (+) 954 WP_020450927.1 BMP family ABC transporter substrate-binding protein Regulator
  RFN66_RS07205 (RFN66_07205) comZ 1384507..1384692 (+) 186 WP_011197761.1 ComZ family protein Regulator
  RFN66_RS07210 (RFN66_07210) - 1384745..1384987 (-) 243 WP_020450928.1 hypothetical protein -
  RFN66_RS07215 (RFN66_07215) - 1385156..1386094 (+) 939 WP_003180588.1 beta-ketoacyl-ACP synthase III -
  RFN66_RS07220 (RFN66_07220) fabF 1386116..1387354 (+) 1239 WP_003180590.1 beta-ketoacyl-ACP synthase II -
  RFN66_RS07225 (RFN66_07225) - 1387440..1388228 (+) 789 WP_145624419.1 DUF2268 domain-containing protein -
  RFN66_RS07230 (RFN66_07230) - 1388420..1389394 (+) 975 WP_003180594.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35390.09 Da        Isoelectric Point: 4.7166

>NTDB_id=875893 RFN66_RS07200 WP_020450927.1 1383543..1384496(+) (med) [Bacillus paralicheniformis strain CP47]
MVYRLVAIFFILLALSGCGQSPLKGKIEKVGLLVPDTINDQVWGTKGYKGLLRIQSVYNVDVYYKEGIDNDAAIKMAVED
FHKKGVNLIYGHGSEYEKAFNEICKDYPDIHFVLMNSKADHPNVTSISLEGEAMGFFGGMTAAHQSKTKKIGVLATYKWQ
PEVEGFSEGAKYLDPDIEVMTEYVGQWDDSENAVKLYEKMKKAGADVVYPAGDGYNVPVIEQIKKDGLYAIGYVSDQSEL
GENVVLTSTIQHVDDAYELTADEFNKGTLKGGKRSFDIQDGVIEMGEFSPVVDQSFQEKMNRLIDEYKKTNKLPNEH

Nucleotide


Download         Length: 954 bp        

>NTDB_id=875893 RFN66_RS07200 WP_020450927.1 1383543..1384496(+) (med) [Bacillus paralicheniformis strain CP47]
ATGGTGTACAGGCTTGTCGCGATTTTTTTCATTCTCCTGGCGCTAAGCGGCTGCGGACAATCGCCGCTGAAAGGGAAAAT
TGAAAAAGTCGGTTTGCTTGTCCCTGATACGATAAATGACCAAGTATGGGGAACCAAAGGATATAAAGGATTATTAAGAA
TACAATCCGTCTACAATGTCGACGTCTATTATAAAGAGGGAATCGATAATGACGCTGCCATTAAAATGGCTGTAGAAGAT
TTTCACAAAAAAGGCGTCAACCTCATCTACGGGCACGGAAGCGAATATGAAAAAGCCTTTAATGAGATATGCAAAGATTA
TCCTGATATTCATTTTGTTTTAATGAACTCGAAAGCCGATCACCCAAATGTGACAAGCATATCGCTTGAAGGAGAAGCGA
TGGGGTTCTTCGGCGGAATGACGGCGGCCCATCAGTCAAAAACAAAGAAAATCGGCGTGCTCGCAACGTATAAATGGCAG
CCTGAAGTAGAAGGATTTTCCGAAGGGGCTAAATACCTCGATCCGGACATTGAGGTGATGACAGAATATGTCGGCCAGTG
GGACGACAGCGAAAATGCCGTCAAACTGTATGAAAAAATGAAGAAGGCAGGCGCGGATGTTGTGTATCCGGCCGGAGACG
GGTATAATGTCCCTGTCATTGAACAAATCAAAAAGGACGGGCTGTACGCTATCGGCTATGTAAGCGACCAGTCGGAATTG
GGTGAGAATGTCGTTTTGACAAGCACTATACAGCATGTAGATGACGCTTATGAACTCACCGCCGACGAGTTTAATAAAGG
AACGCTTAAAGGCGGCAAGCGCTCATTTGACATTCAAGACGGCGTCATCGAAATGGGAGAATTCAGCCCTGTTGTCGATC
AGTCATTTCAAGAAAAGATGAATCGGCTGATTGACGAATACAAAAAAACAAACAAACTGCCAAACGAACATTGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6N2FML9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

68.153

99.054

0.675