Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   RFN65_RS19135 Genome accession   NZ_CP133703
Coordinates   3707527..3707667 (-) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain CP35     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3702527..3712667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RFN65_RS19130 (RFN65_19130) - 3706409..3707581 (-) 1173 Protein_3764 condensation domain-containing protein -
  RFN65_RS19135 (RFN65_19135) comS 3707527..3707667 (-) 141 WP_010886404.1 competence protein ComS Regulator
  RFN65_RS19140 (RFN65_19140) srfAB 3707711..3710803 (-) 3093 Protein_3766 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=875866 RFN65_RS19135 WP_010886404.1 3707527..3707667(-) (comS) [Bacillus subtilis strain CP35]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=875866 RFN65_RS19135 WP_010886404.1 3707527..3707667(-) (comS) [Bacillus subtilis strain CP35]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1