Detailed information NTG0875766

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: RG306_RS09435
• Genome accession: NZ_CP133666
• Coordinates: 2054069..2054722 (+)
• Length: 217 a.a.
• NCBI ID: WP_005029252.1
• Uniprot ID: N9F8A0
• Organism: Acinetobacter bereziniae strain UCO-553
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2049069..2059722

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RG306_RS09400 (RG306_09400)	kdsB	2049477..2050238 (+)	762	WP_005029263.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
RG306_RS09405 (RG306_09405)	-	2050276..2051256 (+)	981	WP_005029261.1	DNA polymerase III, delta' subunit	-
RG306_RS09410 (RG306_09410)	-	2051283..2051624 (+)	342	WP_004830992.1	PilZ domain-containing protein	-
RG306_RS09415 (RG306_09415)	-	2051652..2052425 (+)	774	WP_005029259.1	TatD family hydrolase	-
RG306_RS09420 (RG306_09420)	-	2052510..2053124 (+)	615	WP_005029256.1	TetR/AcrR family transcriptional regulator	-
RG306_RS09425 (RG306_09425)	-	2053130..2053696 (+)	567	WP_005029254.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
RG306_RS09430 (RG306_09430)	xcpV	2053683..2054066 (+)	384	WP_004830987.1	type II secretion system minor pseudopilin GspI	Machinery gene
RG306_RS09435 (RG306_09435)	xcpW	2054069..2054722 (+)	654	WP_005029252.1	type II secretion system minor pseudopilin GspJ	Machinery gene
RG306_RS09440 (RG306_09440)	gspK	2054715..2055686 (+)	972	WP_004830985.1	type II secretion system minor pseudopilin GspK	-
RG306_RS09445 (RG306_09445)	-	2055912..2056508 (+)	597	WP_005029250.1	6-carboxytetrahydropterin synthase	-
RG306_RS09450 (RG306_09450)	ung	2056583..2057296 (+)	714	WP_004830983.1	uracil-DNA glycosylase	-
RG306_RS09455 (RG306_09455)	-	2057293..2058414 (+)	1122	WP_004830982.1	enoyl-CoA hydratase/isomerase family protein	-
RG306_RS09460 (RG306_09460)	tadA	2058421..2058945 (+)	525	WP_005029246.1	tRNA adenosine(34) deaminase TadA	-
RG306_RS09465 (RG306_09465)	-	2059032..2059466 (+)	435	WP_004830980.1	SRPBCC family protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 25078.60 Da
• Isoelectric Point: 8.2714

>NTDB_id=875766 RG306_RS09435 WP_005029252.1 2054069..2054722(+) (xcpW) [Acinetobacter bereziniae strain UCO-553]
MNVVQNKNNNTVKMQKRSGFTLIELLVAIAIFAVLSALGWKIFDYLIKVKDRNVMHEENLGQLQGAYQQIQRDTLQIVPI
SARSGEQVEPALRLDRQKLSFSKAGVTDPLKQGLSPYERIEYGYDQQEKKLYRLKYSNLNRNSSEQPLSSVMLTDVDAYQ
IEILNPNESDRWPNDLTKNDSQLPRGIKMKITIHEVEYEWIFSLLNTDFLIKNNQNG

Nucleotide

• Length: 654 bp

>NTDB_id=875766 RG306_RS09435 WP_005029252.1 2054069..2054722(+) (xcpW) [Acinetobacter bereziniae strain UCO-553]
ATGAACGTCGTCCAAAATAAAAACAATAATACTGTCAAAATGCAGAAAAGATCAGGTTTTACTTTGATTGAGCTACTTGT
CGCAATTGCTATTTTTGCTGTGCTTTCTGCCTTGGGTTGGAAAATATTTGATTATTTGATTAAGGTCAAAGATCGTAATG
TGATGCACGAAGAGAATTTAGGGCAACTCCAAGGTGCATATCAACAAATTCAGCGTGATACATTGCAAATCGTGCCAATT
TCAGCCCGAAGTGGTGAACAAGTTGAACCTGCATTGCGCTTAGATCGACAAAAACTATCATTTAGTAAAGCTGGTGTTAC
AGATCCTTTAAAGCAAGGTCTCTCACCTTATGAGCGAATAGAATACGGTTATGACCAGCAAGAGAAGAAACTATATCGAT
TAAAGTATTCCAATCTGAATCGAAATAGCTCGGAACAACCATTGTCGAGTGTCATGCTGACGGATGTAGATGCCTATCAA
ATTGAAATACTCAATCCAAATGAGTCAGATCGTTGGCCAAATGACTTAACTAAAAATGATAGCCAATTACCGCGTGGAAT
TAAAATGAAAATCACGATTCATGAAGTAGAATATGAGTGGATTTTTAGTTTATTGAATACTGATTTTTTGATAAAGAATA
ATCAAAATGGATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (70-201)

• Prokaryotic N-terminal methylation motif (N_methyl) (14-38)

3D structure

• AlphaFold DB: N9F8A0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	59.813	98.618	0.59