Detailed information    

insolico Bioinformatically predicted

Overview


Name   cinA   Type   Machinery gene
Locus tag   UXR74_RS06050 Genome accession   NZ_CP149805
Coordinates   1246116..1247267 (+) Length   383 a.a.
NCBI ID   WP_050977972.1    Uniprot ID   -
Organism   Staphylococcus aureus strain BSN122     
Function   unknown (predicted from homology)   
Unclear

Genomic Context


Location: 1241116..1252267
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  UXR74_RS06025 (UXR74_06025) - 1241944..1243230 (+) 1287 WP_000664764.1 pitrilysin family protein -
  UXR74_RS06030 (UXR74_06030) - 1243230..1243934 (+) 705 WP_000646227.1 SDR family NAD(P)-dependent oxidoreductase -
  UXR74_RS06035 (UXR74_06035) - 1244039..1244866 (+) 828 WP_000214890.1 YmfK family protein -
  UXR74_RS06040 (UXR74_06040) - 1244885..1245277 (+) 393 WP_000859443.1 RodZ family helix-turn-helix domain-containing protein -
  UXR74_RS06045 (UXR74_06045) pgsA 1245311..1245889 (+) 579 WP_001025093.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  UXR74_RS06050 (UXR74_06050) cinA 1246116..1247267 (+) 1152 WP_050977972.1 CinA family nicotinamide mononucleotide deamidase-related protein Machinery gene
  UXR74_RS06055 (UXR74_06055) recA 1247432..1248475 (+) 1044 WP_000368166.1 recombinase RecA Machinery gene
  UXR74_RS06060 (UXR74_06060) rny 1248829..1250388 (+) 1560 WP_001050913.1 ribonuclease Y -
  UXR74_RS06065 (UXR74_06065) - 1250685..1250900 (-) 216 WP_000026308.1 hypothetical protein -
  UXR74_RS06070 (UXR74_06070) - 1251074..1251871 (+) 798 WP_001222105.1 TIGR00282 family metallophosphoesterase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 43208.48 Da        Isoelectric Point: 6.0526

>NTDB_id=875563 UXR74_RS06050 WP_050977972.1 1246116..1247267(+) (cinA) [Staphylococcus aureus strain BSN122]
MSIAIIAVGSELLLGQIANTNGQFLSKVFNEIGQNVLEHKVIGDNKKPLESSVRHALEKYDTVILTGGLGPTKDDLTKHT
VAQIVGKDLVIDEPSLKYIESYFEEQGQEMTPNNKQQALVIEGSTVLTNHHGMAPGMMVNFENKQIILLPGPPKEMQPMV
KNELLSHFINHNRIIHSELLRFAGIGESKVETILIDLIDKQTNPTIAPLAGSHEVYIRLTANADSKEQAQSLIQPVKQEI
LDRIGEYYYGSDDTLIEQAVIKKIHEPFVIYDGITNGALYHRLKEVDLNDVLKGMINHNENFVDINKPIEQQLKDAVQFV
NKLFNVSSAIILLEYDGVVHIGYDNNFEFKTEQFKMSKSRNLLKNRSQNYALIRLLNWLRTTN

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=875563 UXR74_RS06050 WP_050977972.1 1246116..1247267(+) (cinA) [Staphylococcus aureus strain BSN122]
ATGTCAATTGCCATTATTGCTGTAGGCTCAGAACTATTGCTAGGTCAAATCGCTAATACCAACGGACAATTTCTATCTAA
AGTATTTAATGAAATTGGACAAAATGTATTAGAACATAAAGTTATTGGAGATAATAAAAAACCTTTAGAATCAAGTGTAC
GTCATGCGCTAGAAAAATATGATACTGTTATTTTAACAGGTGGCTTAGGTCCTACGAAAGATGACTTAACGAAGCATACA
GTGGCCCAGATTGTTGGTAAAGATTTAGTTATTGATGAGCCTTCTTTAAAATATATTGAAAGCTATTTTGAGGAACAAGG
ACAAGAAATGACACCTAATAATAAACAACAGGCTTTAGTAATTGAAGGTTCAACTGTATTAACAAATCATCATGGCATGG
CTCCAGGAATGATGGTGAATTTTGAAAACAAACAAATTATTTTATTACCAGGTCCACCGAAAGAAATGCAACCAATGGTG
AAAAATGAATTGTTGTCACATTTTATAAACCATAATCGAATTATACATTCTGAACTATTAAGATTTGCGGGAATAGGTGA
ATCTAAAGTAGAAACAATATTAATAGATCTTATCGATAAACAGACTAATCCTACGATTGCGCCTTTGGCGGGAAGTCATG
AAGTATATATTAGATTGACTGCAAATGCCGACTCAAAAGAACAAGCACAATCATTGATTCAACCTGTTAAACAAGAAATT
CTTGATCGTATTGGAGAATATTATTATGGTTCAGATGACACATTAATTGAGCAAGCTGTAATAAAGAAAATTCATGAACC
TTTTGTAATATATGATGGTATTACTAATGGTGCTTTATATCATCGATTGAAAGAAGTGGATTTAAACGATGTTCTAAAGG
GTATGATTAATCACAATGAAAACTTTGTTGATATTAATAAACCTATTGAGCAGCAATTAAAAGATGCAGTGCAATTTGTT
AATAAATTGTTTAATGTGTCATCAGCAATTATTCTATTAGAGTATGATGGTGTAGTTCATATAGGCTATGATAATAACTT
TGAATTTAAAACTGAGCAATTTAAAATGTCTAAATCTAGAAATTTATTAAAGAACAGAAGTCAAAATTATGCGCTCATAA
GATTATTAAATTGGCTTAGAACAACAAATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

39.903

100

0.428