Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RE433_RS06140 Genome accession   NZ_CP133649
Coordinates   1172462..1172638 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus cereus strain B6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1167462..1177638
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RE433_RS06120 (RE433_06120) clpC 1167793..1170393 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  RE433_RS06125 (RE433_06125) - 1170432..1170614 (-) 183 WP_001211116.1 YjzD family protein -
  RE433_RS06130 (RE433_06130) - 1170771..1171505 (+) 735 WP_000028691.1 hydrolase -
  RE433_RS06135 (RE433_06135) - 1171535..1172407 (+) 873 WP_000487722.1 NAD(P)-dependent oxidoreductase -
  RE433_RS06140 (RE433_06140) comZ 1172462..1172638 (+) 177 WP_001986215.1 ComZ family protein Regulator
  RE433_RS06145 (RE433_06145) fabH 1173176..1174108 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  RE433_RS06150 (RE433_06150) fabF 1174140..1175378 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  RE433_RS06155 (RE433_06155) - 1175485..1176273 (+) 789 WP_000513275.1 DUF2268 domain-containing protein -
  RE433_RS06160 (RE433_06160) - 1176417..1177163 (+) 747 WP_000966128.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=875496 RE433_RS06140 WP_001986215.1 1172462..1172638(+) (comZ) [Bacillus cereus strain B6]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=875496 RE433_RS06140 WP_001986215.1 1172462..1172638(+) (comZ) [Bacillus cereus strain B6]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTACGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586