Detailed information NTG0087546

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: LTWDN19_RS10885
• Genome accession: NZ_AP024685
• Coordinates: 1324707..1325414 (-)
• Length: 235 a.a.
• NCBI ID: WP_080563403.1
• Uniprot ID: -
• Organism: Latilactobacillus curvatus strain WDN19
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1319707..1330414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LTWDN19_RS06795 (LTWDN19_13560)	rpoC	1320993..1324634 (+)	3642	WP_004270200.1	DNA-directed RNA polymerase subunit beta'	-
LTWDN19_RS10885	comC	1324707..1325414 (-)	708	WP_080563403.1	A24 family peptidase	Machinery gene
LTWDN19_RS06805 (LTWDN19_13580)	rpsL	1325685..1326098 (+)	414	WP_004270179.1	30S ribosomal protein S12	-
LTWDN19_RS06810 (LTWDN19_13590)	rpsG	1326188..1326658 (+)	471	WP_004270185.1	30S ribosomal protein S7	-
LTWDN19_RS06815 (LTWDN19_13600)	fusA	1326750..1328837 (+)	2088	WP_004270213.1	elongation factor G	-
LTWDN19_RS06820 (LTWDN19_13610)	rsgA	1329482..1329955 (-)	474	WP_081326585.1	ribosome small subunit-dependent GTPase A	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26572.90 Da
• Isoelectric Point: 6.9137

>NTDB_id=87546 LTWDN19_RS10885 WP_080563403.1 1324707..1325414(-) (comC) [Latilactobacillus curvatus strain WDN19]
MTRLLIYFLTFVIGACCASFLTVCAWRWPLGLSITWPGSRCDFCHHALAWYDLCPIISYLILRGHCRYCDTRIQHHFFTS
EVIGGLLACCLASQYFTPQIGYLLLILYLLSLVDIFHTALYPVPMVLAFMPLFIDYWPTNHWLSALLIGSTLSVINYFSD
GIGTGDIELLAILGLWFGLEVTLSMLLIACLLCLIKYLIDSLHHPVVLALVGRRPIPFVPYISYGVLIVLFIVNT

Nucleotide

• Length: 708 bp

>NTDB_id=87546 LTWDN19_RS10885 WP_080563403.1 1324707..1325414(-) (comC) [Latilactobacillus curvatus strain WDN19]
ATGACACGTTTGTTAATATATTTTTTAACCTTTGTTATTGGCGCGTGTTGCGCCTCTTTTTTAACTGTTTGTGCTTGGCG
TTGGCCACTCGGTTTATCCATCACATGGCCTGGTTCACGGTGTGACTTCTGCCATCACGCCCTCGCTTGGTACGACTTAT
GTCCAATCATCAGTTACCTCATTCTCAGAGGGCACTGCCGCTATTGTGATACTCGAATCCAGCACCATTTTTTTACTAGT
GAGGTTATTGGCGGCTTGTTAGCGTGTTGTTTAGCCAGTCAATATTTCACACCACAGATTGGCTATTTATTGCTTATCCT
TTATTTGTTGAGCCTAGTCGATATTTTCCATACAGCTCTATACCCAGTTCCAATGGTACTGGCTTTTATGCCTTTGTTTA
TTGACTACTGGCCGACAAACCATTGGCTCAGTGCCCTATTGATTGGCAGCACCTTATCTGTCATCAACTACTTTTCAGAT
GGCATCGGTACTGGTGACATTGAATTATTGGCAATTCTTGGGTTGTGGTTTGGATTGGAGGTCACCCTATCCATGTTATT
AATTGCCTGTCTCCTCTGTTTAATCAAATATCTCATTGATAGTCTCCACCATCCAGTTGTCCTCGCCTTAGTCGGACGCC
GCCCAATTCCATTTGTCCCGTATATCAGCTACGGTGTCTTAATCGTTTTGTTTATTGTAAACACATAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (12-94)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	50.661	96.596	0.489