Detailed information NTG0875385

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RFF10_RS08945
• Genome accession: NZ_CP133636
• Coordinates: 1927791..1928912 (+)
• Length: 373 a.a.
• NCBI ID: WP_250249269.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain Past29
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1922791..1933912

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RFF10_RS08925 (RFF10_08925)	napG	1924970..1925722 (+)	753	WP_005718376.1	ferredoxin-type protein NapG	-
RFF10_RS08930 (RFF10_08930)	napH	1925722..1926597 (+)	876	WP_005757794.1	quinol dehydrogenase ferredoxin subunit NapH	-
RFF10_RS08935 (RFF10_08935)	-	1926603..1927028 (+)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
RFF10_RS08940 (RFF10_08940)	-	1927044..1927637 (+)	594	WP_005718382.1	cytochrome c3 family protein	-
RFF10_RS08945 (RFF10_08945)	dprA	1927791..1928912 (+)	1122	WP_250249269.1	DNA-processing protein DprA	Machinery gene
RFF10_RS08950 (RFF10_08950)	lptD	1929018..1931366 (-)	2349	WP_250249267.1	LPS assembly protein LptD	-
RFF10_RS08955 (RFF10_08955)	-	1931430..1931981 (-)	552	WP_005724442.1	DNA-3-methyladenine glycosylase I	-
RFF10_RS08960 (RFF10_08960)	tal	1932139..1933092 (+)	954	WP_250249265.1	transaldolase	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41613.79 Da
• Isoelectric Point: 6.2635

>NTDB_id=875385 RFF10_RS08945 WP_250249269.1 1927791..1928912(+) (dprA) [Pasteurella multocida strain Past29]
MSSYLPLLLRLLQIPRLGSLAIQRLLEHVSPAELMEYDTKAFQQMGWTAQQIQRWFTPENRYIDPALAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTDTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPVDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=875385 RFF10_RS08945 WP_250249269.1 1927791..1928912(+) (dprA) [Pasteurella multocida strain Past29]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCAGCGTTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATGGGCTGGACGGCACAGCAGATTCAGC
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCGCGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCACCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCGCGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCCCCTGTGGCAGAAAATTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTATCTTTGGGGACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATAAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAAGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATTTACCTGT
TGATACCTTATTAGTACAGCTTTTAACTTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGTAAAT
AA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (319-367)

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.081	99.196	0.606
dprA	Glaesserella parasuis strain SC1401	53.429	93.834	0.501
dprA	Vibrio cholerae strain A1552	45.722	100	0.458
dprA	Vibrio campbellii strain DS40M4	45.405	99.196	0.45
dprA	Legionella pneumophila strain ERS1305867	39.623	99.464	0.394