Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   WID27_RS27185 Genome accession   NZ_CP149796
Coordinates   6293147..6294880 (-) Length   577 a.a.
NCBI ID   WP_070203980.1    Uniprot ID   A0A1E7LKI6
Organism   Streptomyces sp. F41     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 6288147..6299880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WID27_RS27170 (WID27_27170) - 6289021..6289659 (-) 639 WP_339153244.1 helix-turn-helix transcriptional regulator -
  WID27_RS27175 (WID27_27175) - 6290007..6291203 (+) 1197 WP_070203982.1 RNA polymerase sigma factor -
  WID27_RS27180 (WID27_27180) - 6291219..6293147 (-) 1929 WP_070203981.1 ABC transporter ATP-binding protein -
  WID27_RS27185 (WID27_27185) rcrP 6293147..6294880 (-) 1734 WP_070203980.1 ABC transporter ATP-binding protein Regulator
  WID27_RS27190 (WID27_27190) - 6295016..6296461 (-) 1446 WP_339153245.1 FGGY family carbohydrate kinase -
  WID27_RS27195 (WID27_27195) - 6296514..6296822 (-) 309 WP_019763913.1 hypothetical protein -

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62580.79 Da        Isoelectric Point: 5.2682

>NTDB_id=875268 WID27_RS27185 WP_070203980.1 6293147..6294880(-) (rcrP) [Streptomyces sp. F41]
MLIKLLRAHLGPYKKPIVLLVLLQLLQTCATLYLPSLNADIIDNGVVKGDTGYILEFGGLMIAVSLIQVLCNVGAVFYGA
RTASALGRDVRAAVFDRVQSFSARELGRFGAPSLITRTTNDVQQVQMLVLMAFTLMVSAPIMCIGGIIMALGQDVPLSAV
LLAVVPVLGISVSIIVAKMRPLFRTMQERLDTVNRVLREQITGNRVIRAFVRDRYEEERFRGANTELTDVSVATGRLMAL
MFPTVMTVVNLSSVAVVWFGAHRIDSGGMQIGALTAFLAYLMQIVMAVMMATFMFMMVPRAEVCAERIEEVLGTDSSVVP
PVSPVTELRRHGRLEVRGAEFRYPGAEEPVLRAVDLVARPGETTAIIGSTGSGKSTLLGLVPRLFDVTDGEVLVDGEDVR
TLDPVLLAKTVSLVPQKPYLFSGTVATNLRYGNPDATDEELWHALEVAQAKEFVEGLEHGLEAPIAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYATDAALRAALARETAAATVVIVAQRVSTIRDADRILVLDEGRVVGSGTHHELMDGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=875268 WID27_RS27185 WP_070203980.1 6293147..6294880(-) (rcrP) [Streptomyces sp. F41]
GTGCTCATAAAACTCCTGCGGGCCCATCTGGGCCCGTACAAGAAACCCATCGTGCTGCTGGTGCTCCTCCAGCTGCTCCA
GACCTGCGCCACCCTGTATCTGCCCAGCCTGAACGCGGACATCATTGACAACGGTGTCGTCAAGGGCGATACCGGCTACA
TCCTGGAGTTCGGCGGCCTCATGATCGCCGTCAGCCTGATCCAGGTGCTCTGCAACGTGGGGGCCGTCTTCTACGGGGCC
CGGACCGCGTCCGCGCTGGGGCGGGACGTGCGGGCGGCGGTCTTCGACCGGGTGCAGTCGTTCTCGGCCCGGGAGCTGGG
GCGGTTCGGGGCGCCCTCGCTGATCACGCGGACCACCAATGACGTCCAGCAGGTCCAGATGCTGGTGCTGATGGCGTTCA
CCCTGATGGTCTCGGCGCCGATCATGTGTATCGGCGGCATCATCATGGCGCTCGGCCAGGACGTCCCGCTCTCGGCCGTG
CTGCTGGCGGTGGTGCCGGTACTCGGGATCTCGGTGAGCATCATCGTGGCGAAGATGCGGCCGCTGTTCCGGACGATGCA
GGAGCGGCTGGACACGGTGAACCGGGTGCTGCGCGAGCAGATCACCGGTAACCGGGTGATCCGGGCGTTCGTCCGTGACC
GTTACGAGGAGGAGCGGTTCCGGGGCGCCAACACCGAGCTGACCGATGTGTCGGTGGCGACCGGGCGGCTGATGGCGCTG
ATGTTCCCGACCGTCATGACGGTGGTCAACCTGTCGTCCGTCGCGGTGGTCTGGTTCGGTGCGCACCGCATCGACAGCGG
CGGGATGCAGATCGGTGCGCTGACCGCGTTCCTCGCGTATCTGATGCAGATCGTGATGGCGGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGCGCCGAGGTGTGCGCCGAGCGCATCGAGGAGGTGCTCGGCACCGATTCGAGCGTCGTGCCG
CCGGTCTCGCCCGTGACCGAGCTGCGCCGGCACGGGCGGCTGGAGGTGCGCGGTGCGGAGTTCCGCTACCCGGGCGCCGA
GGAGCCGGTGCTGCGGGCCGTCGATCTGGTGGCGCGCCCCGGCGAGACCACGGCGATCATCGGGTCGACCGGAAGCGGGA
AGTCCACGCTGCTCGGTCTCGTACCCCGGCTGTTCGATGTGACGGACGGCGAGGTGCTGGTCGACGGCGAGGACGTGCGG
ACGCTGGATCCGGTGCTGCTGGCGAAGACGGTGTCCCTGGTGCCGCAGAAGCCGTACCTCTTCTCGGGGACGGTCGCGAC
GAACCTGCGGTACGGGAATCCGGACGCCACCGACGAGGAGCTGTGGCACGCGCTGGAGGTGGCGCAGGCCAAGGAGTTCG
TGGAAGGGCTGGAACACGGACTGGAGGCGCCGATCGCGCAGGGCGGCACCAATGTGTCGGGCGGTCAGCGGCAGCGGCTC
GCCATCGCGCGGACGCTGGTGCAGCGGCCGGAGATCTATCTCTTCGACGACTCGTTCTCGGCGCTGGACTACGCGACCGA
CGCGGCGCTGCGGGCGGCGCTGGCCCGGGAGACGGCCGCGGCGACCGTGGTGATCGTGGCGCAGCGGGTCTCCACCATCC
GTGACGCCGACCGGATCCTGGTGCTGGACGAGGGGCGGGTCGTGGGCAGCGGTACCCATCACGAGCTGATGGACGGCAAT
GAGACGTACCGGGAGATCGTGCTCTCCCAGCTGACGGAAGCGGAGGCCGCGTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(352-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1E7LKI6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.863

100

0.402