Detailed information    

insolico Bioinformatically predicted

Overview

Name   comK   Type   Regulator
Locus tag   RE735_RS14350 Genome accession   NZ_CP133585
Coordinates   2670153..2670731 (-) Length   192 a.a.
NCBI ID   WP_017366958.1    Uniprot ID   A0A5D4P9G2
Organism   Bacillus aerius strain NEB1378     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2665153..2675731
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RE735_RS14305 (RE735_14305) lepB 2665548..2666060 (-) 513 WP_309173537.1 signal peptidase I -
  RE735_RS14310 (RE735_14310) - 2666060..2666713 (-) 654 WP_373467166.1 TVP38/TMEM64 family protein -
  RE735_RS14315 (RE735_14315) - 2666836..2667198 (+) 363 WP_309173539.1 hypothetical protein -
  RE735_RS14320 (RE735_14320) - 2667286..2667720 (+) 435 WP_309173540.1 enoyl-CoA hydratase -
  RE735_RS14325 (RE735_14325) - 2667861..2668139 (-) 279 WP_309173541.1 barstar family protein -
  RE735_RS14330 (RE735_14330) - 2668202..2668411 (-) 210 WP_309173542.1 hypothetical protein -
  RE735_RS14335 (RE735_14335) - 2668522..2668746 (+) 225 WP_309173543.1 hypothetical protein -
  RE735_RS14340 (RE735_14340) - 2668809..2669291 (+) 483 WP_309173544.1 hypothetical protein -
  RE735_RS14345 (RE735_14345) - 2669254..2669736 (-) 483 WP_309173545.1 hypothetical protein -
  RE735_RS14350 (RE735_14350) comK 2670153..2670731 (-) 579 WP_017366958.1 competence protein ComK Regulator
  RE735_RS14355 (RE735_14355) - 2671022..2671258 (+) 237 WP_247544382.1 IDEAL domain-containing protein -
  RE735_RS14360 (RE735_14360) - 2671317..2671823 (-) 507 Protein_2826 SDR family oxidoreductase -
  RE735_RS14365 (RE735_14365) - 2671868..2672233 (+) 366 Protein_2827 Rieske 2Fe-2S domain-containing protein -
  RE735_RS14370 (RE735_14370) - 2672366..2673703 (+) 1338 WP_373467223.1 globin-coupled sensor protein -
  RE735_RS14375 (RE735_14375) - 2673765..2674349 (+) 585 WP_309173546.1 histidine phosphatase family protein -

Sequence

Protein


Download         Length: 192 a.a.        Molecular weight: 22348.40 Da        Isoelectric Point: 8.7996

>NTDB_id=875131 RE735_RS14350 WP_017366958.1 2670153..2670731(-) (comK) [Bacillus aerius strain NEB1378]
MSGISETPLDSYVINQTTMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHIFQESSLGDTVVTFTNEQSVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=875131 RE735_RS14350 WP_017366958.1 2670153..2670731(-) (comK) [Bacillus aerius strain NEB1378]
GTGTCAGGAATTAGTGAAACCCCTTTAGATTCATACGTCATTAACCAAACAACAATGGCGGTCCTTCCAGTTGAAGAAGG
AAAACGAGTATATTCAAAAGTGATCGAAAGAGAGACCAGCTTTTATGTTGAATTAAAACCGCTGCAAATTATCGAACGCA
GCTGCAGGTTTTTTGGCTCAAGCTATGCAGGTAGAAAGGCAGGAACATACGAAGTAACAGGAATTTCACATAAGCCTCCC
ATCGTGATTGATTCATCCAATCATCTGTATTTCTTCCCAACCTATTCATCCAACCGCCCTCAATGCGGATGGATCTCCCA
CAAATACATTCATATCTTTCAGGAATCATCCCTCGGAGACACGGTTGTTACTTTTACAAATGAGCAATCGGTCAAACTAG
ATGTCTCCTATAAGTCATTTGAGAGTCAGGTACACCGAACGGCGTATCTCCGAACGAAATTTCAAGACCGTCTTGATGGA
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAGCAGCAGCTCAACCTTGTGTATGATTTTATCTTAAGAGA
ACTTCGTAATCGTTATTAG

Domains

Predicted by InterproScan.

ComK protein (ComK)

(10-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5D4P9G2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

61.458

100

0.615