Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RE735_RS13960 Genome accession   NZ_CP133585
Coordinates   2596372..2596569 (-) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus aerius strain NEB1378     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2591372..2601569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RE735_RS13935 (RE735_13935) - 2591735..2592715 (-) 981 WP_309173485.1 ABC transporter ATP-binding protein -
  RE735_RS13940 (RE735_13940) - 2592886..2593680 (-) 795 WP_309173486.1 DUF2268 domain-containing protein -
  RE735_RS13945 (RE735_13945) fabF 2593758..2594999 (-) 1242 WP_309173487.1 beta-ketoacyl-ACP synthase II -
  RE735_RS13950 (RE735_13950) - 2595021..2595959 (-) 939 WP_309173488.1 beta-ketoacyl-ACP synthase III -
  RE735_RS13955 (RE735_13955) - 2596129..2596362 (+) 234 WP_309173489.1 hypothetical protein -
  RE735_RS13960 (RE735_13960) comZ 2596372..2596569 (-) 198 WP_008348507.1 ComZ family protein Regulator
  RE735_RS13965 (RE735_13965) med 2596581..2597546 (-) 966 WP_309173490.1 BMP family ABC transporter substrate-binding protein Regulator
  RE735_RS13970 (RE735_13970) - 2597637..2598212 (-) 576 WP_309173491.1 nad binding enzyme -
  RE735_RS13975 (RE735_13975) - 2598288..2599028 (-) 741 WP_309173492.1 hypothetical protein -
  RE735_RS13980 (RE735_13980) - 2599241..2599435 (+) 195 WP_008348514.1 YjzD family protein -
  RE735_RS13985 (RE735_13985) - 2599555..2600820 (-) 1266 WP_309173493.1 MFS transporter -
  RE735_RS13990 (RE735_13990) - 2600989..2601168 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=875127 RE735_RS13960 WP_008348507.1 2596372..2596569(-) (comZ) [Bacillus aerius strain NEB1378]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=875127 RE735_RS13960 WP_008348507.1 2596372..2596569(-) (comZ) [Bacillus aerius strain NEB1378]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662