Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   RE735_RS12735 Genome accession   NZ_CP133585
Coordinates   2376757..2377338 (-) Length   193 a.a.
NCBI ID   WP_309173314.1    Uniprot ID   -
Organism   Bacillus aerius strain NEB1378     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 2371757..2382338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RE735_RS12705 (RE735_12705) - 2371789..2372280 (-) 492 WP_309173308.1 molybdenum cofactor biosynthesis protein MoaE -
  RE735_RS12710 (RE735_12710) - 2372273..2372800 (-) 528 WP_309173309.1 molybdopterin-guanine dinucleotide biosynthesis protein MobB -
  RE735_RS12715 (RE735_12715) glp 2372782..2374056 (-) 1275 WP_309173310.1 gephyrin-like molybdotransferase Glp -
  RE735_RS12720 (RE735_12720) - 2374066..2375082 (-) 1017 WP_309173311.1 MoeB/ThiF family adenylyltransferase -
  RE735_RS12725 (RE735_12725) - 2375112..2375693 (-) 582 WP_309173312.1 molybdenum cofactor guanylyltransferase -
  RE735_RS12730 (RE735_12730) - 2375777..2376694 (+) 918 WP_309173313.1 sigmaE regulated sporulation protein -
  RE735_RS12735 (RE735_12735) rok 2376757..2377338 (-) 582 WP_309173314.1 hypothetical protein Regulator
  RE735_RS12740 (RE735_12740) - 2377820..2378278 (-) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  RE735_RS12745 (RE735_12745) ahpA 2378517..2379059 (-) 543 WP_309173315.1 biofilm-specific peroxidase AhpA -
  RE735_RS12750 (RE735_12750) - 2379331..2380139 (+) 809 Protein_2502 mechanosensitive ion channel family protein -
  RE735_RS12755 (RE735_12755) - 2380164..2380406 (-) 243 WP_003211408.1 YkuS family protein -
  RE735_RS12760 (RE735_12760) - 2380457..2381584 (-) 1128 WP_309175505.1 N-acetyldiaminopimelate deacetylase -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21907.92 Da        Isoelectric Point: 9.7309

>NTDB_id=875120 RE735_RS12735 WP_309173314.1 2376757..2377338(-) (rok) [Bacillus aerius strain NEB1378]
MFNEREALRLRLEQLNEAEVKVIREYQMERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYNQ
PVQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=875120 RE735_RS12735 WP_309173314.1 2376757..2377338(-) (rok) [Bacillus aerius strain NEB1378]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAATGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATGGAACGAGATGCGATTTATGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACAATCAG
CCTGTGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

78.947

98.446

0.777