Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RE395_RS15650 Genome accession   NZ_CP133579
Coordinates   3381582..3381983 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas geniculata strain G303     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3376582..3386983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RE395_RS15635 - 3378593..3380629 (-) 2037 WP_419965204.1 methyl-accepting chemotaxis protein -
  RE395_RS15640 - 3380671..3381201 (-) 531 WP_010482705.1 chemotaxis protein CheW -
  RE395_RS15645 - 3381201..3381563 (-) 363 WP_005410717.1 response regulator -
  RE395_RS15650 pilG 3381582..3381983 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  RE395_RS15655 gshB 3382225..3383172 (+) 948 WP_019338700.1 glutathione synthase -
  RE395_RS15660 - 3383172..3384056 (+) 885 WP_010482701.1 energy transducer TonB family protein -
  RE395_RS15665 tsaB 3384623..3385336 (-) 714 WP_049481813.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=875054 RE395_RS15650 WP_005418455.1 3381582..3381983(-) (pilG) [Stenotrophomonas geniculata strain G303]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=875054 RE395_RS15650 WP_005418455.1 3381582..3381983(-) (pilG) [Stenotrophomonas geniculata strain G303]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAATACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677