Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   WHL52_RS21745 Genome accession   NZ_CP149576
Coordinates   4144099..4144893 (-) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain DSM 10     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4139099..4149893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL52_RS21720 rocD 4139549..4140754 (-) 1206 WP_003242970.1 ornithine aminotransferase -
  WHL52_RS21725 rocR 4140995..4142380 (+) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  WHL52_RS21730 - 4142362..4142550 (-) 189 Protein_4228 ATP-binding protein -
  WHL52_RS21735 - 4142667..4142795 (-) 129 WP_003242634.1 hypothetical protein -
  WHL52_RS21740 htrA 4142815..4144017 (-) 1203 WP_009969578.1 serine protease HtrC Regulator
  WHL52_RS21745 vicX 4144099..4144893 (-) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  WHL52_RS21750 walI 4144915..4145757 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  WHL52_RS21755 walH 4145744..4147111 (-) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  WHL52_RS21760 walK 4147101..4148936 (-) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  WHL52_RS21765 walR 4148944..4149651 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=875031 WHL52_RS21745 WP_003242676.1 4144099..4144893(-) (vicX) [Bacillus subtilis strain DSM 10]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=875031 WHL52_RS21745 WP_003242676.1 4144099..4144893(-) (vicX) [Bacillus subtilis strain DSM 10]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53