Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RE438_RS05995 Genome accession   NZ_CP133557
Coordinates   1155979..1156155 (+) Length   58 a.a.
NCBI ID   WP_048559636.1    Uniprot ID   -
Organism   Bacillus wiedmannii strain EPS29     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1150979..1161155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RE438_RS05975 (RE438_05945) clpB 1151311..1153911 (+) 2601 WP_048559571.1 ATP-dependent chaperone ClpB -
  RE438_RS05980 (RE438_05950) - 1153950..1154132 (-) 183 WP_048559570.1 YjzD family protein -
  RE438_RS05985 (RE438_05955) - 1154289..1155023 (+) 735 WP_000028696.1 hypothetical protein -
  RE438_RS05990 (RE438_05960) - 1155053..1155925 (+) 873 WP_142308254.1 NAD(P)-dependent oxidoreductase -
  RE438_RS05995 (RE438_05965) comZ 1155979..1156155 (+) 177 WP_048559636.1 ComZ family protein Regulator
  RE438_RS06000 (RE438_05970) fabH 1156386..1157318 (+) 933 WP_001100551.1 beta-ketoacyl-ACP synthase III -
  RE438_RS06005 (RE438_05975) fabF 1157350..1158588 (+) 1239 WP_000412643.1 beta-ketoacyl-ACP synthase II -
  RE438_RS06010 (RE438_05980) - 1158695..1159483 (+) 789 WP_048559569.1 DUF2268 domain-containing protein -
  RE438_RS06015 (RE438_05985) - 1159627..1160373 (+) 747 WP_000966116.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6562.75 Da        Isoelectric Point: 4.6828

>NTDB_id=874834 RE438_RS05995 WP_048559636.1 1155979..1156155(+) (comZ) [Bacillus wiedmannii strain EPS29]
MNEKSMQFLQIAMKHLPEAKAILDSNGIALDMEKAQPVLELLMKVMNEAYELGKAEKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=874834 RE438_RS05995 WP_048559636.1 1155979..1156155(+) (comZ) [Bacillus wiedmannii strain EPS29]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATCTTAGATTCGAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGAAAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

94.828

0.569