Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | RDV59_RS04170 | Genome accession | NZ_CP133476 |
| Coordinates | 822952..825222 (-) | Length | 756 a.a. |
| NCBI ID | WP_060775854.1 | Uniprot ID | - |
| Organism | Streptococcus salivarius strain LMG 11489 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 817952..830222
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RDV59_RS04140 (RDV59_04140) | - | 818334..818954 (+) | 621 | WP_002890373.1 | DUF3862 domain-containing protein | - |
| RDV59_RS04145 (RDV59_04145) | - | 819037..819720 (+) | 684 | WP_002890375.1 | TVP38/TMEM64 family protein | - |
| RDV59_RS04150 (RDV59_04150) | - | 819698..820933 (+) | 1236 | WP_038675570.1 | aminoacyltransferase | - |
| RDV59_RS04155 (RDV59_04155) | - | 821031..821993 (+) | 963 | WP_038675572.1 | Gfo/Idh/MocA family protein | - |
| RDV59_RS04160 (RDV59_04160) | - | 822039..822341 (-) | 303 | WP_002885967.1 | DUF1827 family protein | - |
| RDV59_RS04165 (RDV59_04165) | - | 822351..822809 (-) | 459 | WP_038675574.1 | NUDIX hydrolase | - |
| RDV59_RS04170 (RDV59_04170) | clpE | 822952..825222 (-) | 2271 | WP_060775854.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| RDV59_RS04175 (RDV59_04175) | argF | 825465..826445 (+) | 981 | WP_038675579.1 | ornithine carbamoyltransferase | - |
| RDV59_RS04180 (RDV59_04180) | - | 826514..826744 (+) | 231 | WP_002885970.1 | DUF1797 family protein | - |
| RDV59_RS04185 (RDV59_04185) | - | 827058..827738 (+) | 681 | WP_002886081.1 | amino acid ABC transporter permease | - |
| RDV59_RS04190 (RDV59_04190) | - | 827738..828472 (+) | 735 | WP_002886191.1 | amino acid ABC transporter ATP-binding protein | - |
| RDV59_RS04195 (RDV59_04195) | - | 828644..829120 (+) | 477 | WP_037599232.1 | ferrous iron transport protein A | - |
Sequence
Protein
Download Length: 756 a.a. Molecular weight: 83973.05 Da Isoelectric Point: 5.0549
>NTDB_id=874664 RDV59_RS04170 WP_060775854.1 822952..825222(-) (clpE) [Streptococcus salivarius strain LMG 11489]
MLCQNCNLNEASIHLYTNVNGNQQQVDLCQNCYKIMKSDPENPLNQFNQTGGSNFFDDFFSDLNNFRSSNGDLPNTPPTQ
EGGNRGNGGNTQGPGRPGGPRQQAPQQPQGLLEEFGINITDIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGSVPQKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRQDVILFIDEIHEIVGAGNAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILRGIQPKYQDYHHVKYTDEAI
TAAAELSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKDIDKRLIEAENLKAQATRDEDFEKAAYFRDQIAKYKEMQ
KQTIKDQDMPVITEKHIEAIVEQKTNIPVGDLKEKEQSQLLSLADDLKSHVIGQDAAVDKIAKAIRRNRVGLGAPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEV
EKAHPDVLHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAARENRTNSVLNQLGDFFSPEFMNRFD
GIIEFSALSKENLLTIVDLMLDNVNQRLANNGIHLSVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPN
EKDLKAVMTSKGHITIKSAKKAEKTAQKAETAKETD
MLCQNCNLNEASIHLYTNVNGNQQQVDLCQNCYKIMKSDPENPLNQFNQTGGSNFFDDFFSDLNNFRSSNGDLPNTPPTQ
EGGNRGNGGNTQGPGRPGGPRQQAPQQPQGLLEEFGINITDIARRGDIDPVIGRDEEIIRVIEILNRRTKNNPVLIGEPG
VGKTAVVEGLAQKIVDGSVPQKLQGKQVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRQRQDVILFIDEIHEIVGAGNAG
DGNMDAGNILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVKVDEPTVEETITILRGIQPKYQDYHHVKYTDEAI
TAAAELSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKDIDKRLIEAENLKAQATRDEDFEKAAYFRDQIAKYKEMQ
KQTIKDQDMPVITEKHIEAIVEQKTNIPVGDLKEKEQSQLLSLADDLKSHVIGQDAAVDKIAKAIRRNRVGLGAPNRPIG
SFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYDEAGQLTEKVRRNPYSLILLDEV
EKAHPDVLHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAARENRTNSVLNQLGDFFSPEFMNRFD
GIIEFSALSKENLLTIVDLMLDNVNQRLANNGIHLSVTDKVKEKLVDLGYDPKMGARPLRRTIQDHIEDAITDFYLENPN
EKDLKAVMTSKGHITIKSAKKAEKTAQKAETAKETD
Nucleotide
Download Length: 2271 bp
>NTDB_id=874664 RDV59_RS04170 WP_060775854.1 822952..825222(-) (clpE) [Streptococcus salivarius strain LMG 11489]
ATGCTCTGTCAAAACTGTAACCTTAATGAAGCTAGTATTCATTTGTATACCAATGTAAACGGTAATCAGCAACAAGTTGA
CCTCTGTCAAAATTGTTATAAAATCATGAAATCTGACCCAGAGAACCCCCTCAATCAATTCAATCAAACAGGAGGTTCAA
ACTTCTTCGATGATTTCTTCAGCGACCTAAATAACTTCCGTTCTTCTAACGGCGATCTTCCCAATACACCTCCAACACAA
GAAGGTGGTAACCGAGGAAACGGTGGCAATACACAAGGGCCAGGCCGTCCAGGAGGACCACGCCAACAAGCTCCTCAACA
GCCACAAGGTCTTCTTGAAGAGTTCGGCATTAACATCACTGACATCGCTCGTCGTGGAGACATTGATCCTGTTATTGGTC
GTGACGAGGAAATCATTCGTGTCATCGAAATTCTTAACCGCCGTACCAAGAACAACCCCGTCCTCATCGGTGAACCCGGT
GTCGGTAAGACTGCTGTTGTTGAAGGCCTAGCTCAAAAAATCGTTGACGGTAGCGTGCCACAAAAACTCCAAGGCAAACA
AGTCATCCGTCTTGATGTGGTCAGCCTGGTTCAAGGGACTGGTATTCGTGGCCAATTTGAAGAACGCATGCAAAAACTCA
TGGAAGAAATTCGTCAACGTCAGGATGTTATCCTATTTATTGATGAAATCCATGAAATCGTAGGAGCTGGTAATGCTGGT
GATGGCAATATGGATGCTGGAAACATCCTAAAACCTGCTCTTGCTCGTGGAGAACTTCAACTGGTCGGAGCAACAACACT
CAACGAATACCGCATCATCGAAAAAGATGCCGCCCTAGAGCGTCGTATGCAACCAGTTAAGGTTGACGAACCAACGGTTG
AGGAAACCATCACTATTTTGCGTGGTATTCAACCTAAATATCAGGACTACCACCACGTCAAATATACAGACGAAGCGATT
ACTGCAGCTGCAGAATTGTCCAACCGCTACATTCAAGACCGCTTCTTGCCAGACAAGGCCATCGACCTCCTCGATGAAGC
TGGTTCGAAGATGAATTTGACCCTCAATTTTGTTGATCCTAAAGATATCGACAAACGTTTGATTGAGGCTGAAAACCTCA
AGGCTCAAGCTACTCGTGACGAAGACTTTGAAAAAGCTGCCTATTTCCGTGATCAAATTGCCAAATACAAGGAAATGCAA
AAACAAACCATCAAAGACCAAGATATGCCTGTCATCACAGAAAAACATATCGAAGCCATTGTGGAACAAAAAACCAATAT
TCCTGTCGGTGATTTGAAAGAAAAAGAACAATCACAACTTCTTAGTCTTGCTGATGATCTTAAATCACATGTTATTGGAC
AAGATGCCGCAGTTGATAAGATTGCCAAAGCCATCCGCCGTAATCGTGTTGGATTGGGTGCACCAAATCGCCCAATTGGT
AGCTTCCTCTTCGTAGGTCCTACAGGAGTCGGTAAAACTGAACTCTCTAAACAATTGGCGATTGAACTCTTTGGTTCAGC
TGACAGTATGATTCGTTTCGACATGTCAGAATACATGGAAAAACACGCCGTTGCCAAATTAGTCGGTGCCCCTCCAGGAT
ATGTCGGTTACGACGAAGCTGGTCAGTTAACTGAAAAAGTCCGCCGTAATCCTTATTCACTCATTCTTCTGGATGAGGTT
GAAAAAGCTCACCCAGATGTTCTTCACATGTTCCTCCAAGTACTTGACGATGGTCGTTTGACTGATGGTCAAGGACGCAC
TGTAAGTTTCAAAGATACCATTATCATCATGACATCAAATGCTGGTACCGGTAAAGTTGAAGCTAGCGTCGGCTTTGGAG
CTGCCCGTGAAAATCGTACCAATTCTGTTCTTAACCAGCTTGGAGATTTCTTCAGCCCTGAATTTATGAACCGCTTTGAC
GGTATTATCGAATTCTCTGCCCTTAGCAAGGAAAATCTCCTTACTATCGTGGACCTCATGCTTGACAATGTCAACCAACG
CTTGGCTAACAACGGTATCCACCTCAGTGTAACCGATAAGGTTAAGGAGAAATTGGTTGACCTTGGTTATGATCCTAAGA
TGGGGGCTCGACCACTACGTCGTACCATCCAAGATCATATTGAAGATGCTATCACTGACTTCTACCTTGAAAATCCAAAC
GAAAAAGATCTCAAGGCAGTCATGACTTCAAAAGGTCACATCACCATTAAGTCTGCTAAAAAAGCCGAAAAAACTGCTCA
GAAAGCTGAGACAGCAAAAGAAACTGATTAA
ATGCTCTGTCAAAACTGTAACCTTAATGAAGCTAGTATTCATTTGTATACCAATGTAAACGGTAATCAGCAACAAGTTGA
CCTCTGTCAAAATTGTTATAAAATCATGAAATCTGACCCAGAGAACCCCCTCAATCAATTCAATCAAACAGGAGGTTCAA
ACTTCTTCGATGATTTCTTCAGCGACCTAAATAACTTCCGTTCTTCTAACGGCGATCTTCCCAATACACCTCCAACACAA
GAAGGTGGTAACCGAGGAAACGGTGGCAATACACAAGGGCCAGGCCGTCCAGGAGGACCACGCCAACAAGCTCCTCAACA
GCCACAAGGTCTTCTTGAAGAGTTCGGCATTAACATCACTGACATCGCTCGTCGTGGAGACATTGATCCTGTTATTGGTC
GTGACGAGGAAATCATTCGTGTCATCGAAATTCTTAACCGCCGTACCAAGAACAACCCCGTCCTCATCGGTGAACCCGGT
GTCGGTAAGACTGCTGTTGTTGAAGGCCTAGCTCAAAAAATCGTTGACGGTAGCGTGCCACAAAAACTCCAAGGCAAACA
AGTCATCCGTCTTGATGTGGTCAGCCTGGTTCAAGGGACTGGTATTCGTGGCCAATTTGAAGAACGCATGCAAAAACTCA
TGGAAGAAATTCGTCAACGTCAGGATGTTATCCTATTTATTGATGAAATCCATGAAATCGTAGGAGCTGGTAATGCTGGT
GATGGCAATATGGATGCTGGAAACATCCTAAAACCTGCTCTTGCTCGTGGAGAACTTCAACTGGTCGGAGCAACAACACT
CAACGAATACCGCATCATCGAAAAAGATGCCGCCCTAGAGCGTCGTATGCAACCAGTTAAGGTTGACGAACCAACGGTTG
AGGAAACCATCACTATTTTGCGTGGTATTCAACCTAAATATCAGGACTACCACCACGTCAAATATACAGACGAAGCGATT
ACTGCAGCTGCAGAATTGTCCAACCGCTACATTCAAGACCGCTTCTTGCCAGACAAGGCCATCGACCTCCTCGATGAAGC
TGGTTCGAAGATGAATTTGACCCTCAATTTTGTTGATCCTAAAGATATCGACAAACGTTTGATTGAGGCTGAAAACCTCA
AGGCTCAAGCTACTCGTGACGAAGACTTTGAAAAAGCTGCCTATTTCCGTGATCAAATTGCCAAATACAAGGAAATGCAA
AAACAAACCATCAAAGACCAAGATATGCCTGTCATCACAGAAAAACATATCGAAGCCATTGTGGAACAAAAAACCAATAT
TCCTGTCGGTGATTTGAAAGAAAAAGAACAATCACAACTTCTTAGTCTTGCTGATGATCTTAAATCACATGTTATTGGAC
AAGATGCCGCAGTTGATAAGATTGCCAAAGCCATCCGCCGTAATCGTGTTGGATTGGGTGCACCAAATCGCCCAATTGGT
AGCTTCCTCTTCGTAGGTCCTACAGGAGTCGGTAAAACTGAACTCTCTAAACAATTGGCGATTGAACTCTTTGGTTCAGC
TGACAGTATGATTCGTTTCGACATGTCAGAATACATGGAAAAACACGCCGTTGCCAAATTAGTCGGTGCCCCTCCAGGAT
ATGTCGGTTACGACGAAGCTGGTCAGTTAACTGAAAAAGTCCGCCGTAATCCTTATTCACTCATTCTTCTGGATGAGGTT
GAAAAAGCTCACCCAGATGTTCTTCACATGTTCCTCCAAGTACTTGACGATGGTCGTTTGACTGATGGTCAAGGACGCAC
TGTAAGTTTCAAAGATACCATTATCATCATGACATCAAATGCTGGTACCGGTAAAGTTGAAGCTAGCGTCGGCTTTGGAG
CTGCCCGTGAAAATCGTACCAATTCTGTTCTTAACCAGCTTGGAGATTTCTTCAGCCCTGAATTTATGAACCGCTTTGAC
GGTATTATCGAATTCTCTGCCCTTAGCAAGGAAAATCTCCTTACTATCGTGGACCTCATGCTTGACAATGTCAACCAACG
CTTGGCTAACAACGGTATCCACCTCAGTGTAACCGATAAGGTTAAGGAGAAATTGGTTGACCTTGGTTATGATCCTAAGA
TGGGGGCTCGACCACTACGTCGTACCATCCAAGATCATATTGAAGATGCTATCACTGACTTCTACCTTGAAAATCCAAAC
GAAAAAGATCTCAAGGCAGTCATGACTTCAAAAGGTCACATCACCATTAAGTCTGCTAAAAAAGCCGAAAAAACTGCTCA
GAAAGCTGAGACAGCAAAAGAAACTGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
85.714 |
100 |
0.857 |
| clpE | Streptococcus pneumoniae Rx1 |
83.4 |
99.603 |
0.831 |
| clpE | Streptococcus pneumoniae D39 |
83.4 |
99.603 |
0.831 |
| clpE | Streptococcus pneumoniae R6 |
83.4 |
99.603 |
0.831 |
| clpE | Streptococcus pneumoniae TIGR4 |
83.4 |
99.603 |
0.831 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
77.424 |
99.603 |
0.771 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
52.006 |
85.714 |
0.446 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
46.189 |
86.772 |
0.401 |
| clpC | Streptococcus pneumoniae Rx1 |
47.36 |
82.672 |
0.392 |
| clpC | Streptococcus pneumoniae D39 |
47.36 |
82.672 |
0.392 |
| clpC | Streptococcus pneumoniae TIGR4 |
47.2 |
82.672 |
0.39 |
| clpC | Streptococcus thermophilus LMD-9 |
47.04 |
82.672 |
0.389 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.72 |
82.672 |
0.386 |
| clpC | Streptococcus mutans UA159 |
46.486 |
82.804 |
0.385 |