Detailed information NTG0874475

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: RDV54_RS03445
• Genome accession: NZ_CP133471
• Coordinates: 701287..702135 (-)
• Length: 282 a.a.
• NCBI ID: WP_000705318.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain LMG 14557
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 696287..707135

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RDV54_RS03425 (RDV54_03425)	-	696890..697546 (-)	657	WP_000461578.1	MmcQ/YjbR family DNA-binding protein	-
RDV54_RS03430 (RDV54_03430)	-	697589..698221 (-)	633	WP_000638813.1	copper homeostasis protein CutC	-
RDV54_RS03435 (RDV54_03435)	-	698314..698673 (-)	360	WP_001220352.1	YbaN family protein	-
RDV54_RS03440 (RDV54_03440)	topA	698930..701017 (-)	2088	WP_000179664.1	type I DNA topoisomerase	-
RDV54_RS03445 (RDV54_03445)	dprA/cilB/dalA	701287..702135 (-)	849	WP_000705318.1	DNA-processing protein DprA	Machinery gene
RDV54_RS03450 (RDV54_03450)	-	702223..702912 (-)	690	WP_000643976.1	sugar phosphate nucleotidyltransferase	-
RDV54_RS03455 (RDV54_03455)	-	702924..703802 (-)	879	WP_049500425.1	DMT family transporter	-
RDV54_RS03460 (RDV54_03460)	licA	703792..704661 (-)	870	WP_000411223.1	choline kinase LicA	-
RDV54_RS03465 (RDV54_03465)	-	704678..705700 (-)	1023	WP_000609878.1	ribitol-5-phosphate dehydrogenase	-
RDV54_RS03470 (RDV54_03470)	-	705705..706412 (-)	708	WP_000638494.1	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	-

Sequence

Protein

• Length: 282 a.a.
• Molecular weight: 31047.67 Da
• Isoelectric Point: 5.0589

>NTDB_id=874475 RDV54_RS03445 WP_000705318.1 701287..702135(-) (dprA/cilB/dalA) [Streptococcus mitis strain LMG 14557]
MKITNYEIYKLKKSGLTNQQVLAVLEYGENVDQELLLGDIAEISGCRNPAVFMERYFQIDDAHLEKEFQKFPSFSILDDC
YPWDLSEIYDAPVLLFYKGNLDLLKFPKVAVVGSRACSKQGAKSVEKVIQGLENELVIVSGLAKGIDTAAHMAALQNGGK
TIAVIGTGLDVFYPKANKRLQDYIGNDHLVLSEYGPGEQPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERAMEE
GRDVFAIPGSILDGLSDGCHHLIQEGAKLVTSGQDVLAEFEF

Nucleotide

• Length: 849 bp

>NTDB_id=874475 RDV54_RS03445 WP_000705318.1 701287..702135(-) (dprA/cilB/dalA) [Streptococcus mitis strain LMG 14557]
ATGAAAATCACAAACTATGAAATCTATAAATTGAAAAAATCAGGTTTGACCAATCAACAGGTTTTGGCAGTTCTAGAATA
CGGTGAAAATGTCGATCAAGAACTTTTGTTGGGTGATATTGCAGAAATATCAGGTTGCAGAAATCCAGCTGTTTTTATGG
AACGTTACTTTCAGATAGACGATGCGCATTTGGAGAAGGAGTTTCAAAAATTTCCATCTTTCTCTATTTTAGATGACTGT
TACCCTTGGGATTTGAGTGAAATATATGATGCGCCTGTACTTTTATTTTACAAGGGAAATCTTGACCTCTTGAAATTCCC
GAAGGTAGCAGTCGTGGGCAGTCGTGCGTGTAGCAAACAGGGAGCTAAGTCAGTTGAAAAAGTCATTCAGGGCTTGGAAA
ATGAACTGGTTATCGTCAGTGGCTTAGCCAAGGGCATTGACACAGCAGCTCATATGGCAGCTCTTCAGAATGGCGGAAAA
ACCATTGCAGTGATTGGAACAGGACTGGATGTGTTTTATCCTAAAGCCAATAAACGCTTGCAAGACTACATCGGCAATGA
CCATCTGGTTCTAAGTGAATACGGACCTGGTGAACAACCTCTGAAATTTCATTTTCCTGCCCGTAATCGTATCATTGCTG
GACTTTGTCGTGGTGTGATTGTAGCAGAGGCTAAGATGCGTTCAGGTAGTCTCATTACCTGTGAGAGAGCAATGGAAGAA
GGGCGCGATGTCTTTGCTATTCCTGGTAGCATTTTAGATGGACTATCAGACGGTTGCCATCATTTGATTCAAGAAGGGGC
AAAATTGGTCACCAGCGGGCAGGATGTTCTTGCGGAATTTGAATTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (3-64)

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	100	100	1
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	98.582	100	0.986
dprA/cilB/dalA	Streptococcus pneumoniae D39	98.582	100	0.986
dprA/cilB/dalA	Streptococcus pneumoniae R6	98.582	100	0.986
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	98.582	100	0.986
dprA/cilB/dalA	Streptococcus mitis SK321	97.163	100	0.972
dprA	Streptococcus mutans UA159	62.857	99.291	0.624
dprA	Lactococcus lactis subsp. cremoris KW2	55.714	99.291	0.553
dprA	Haemophilus influenzae Rd KW20	38.202	94.681	0.362