Detailed information NTG0087443

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: AABJ83_RS20075
• Genome accession: NZ_AP027563
• Coordinates: 4120384..4121616 (+)
• Length: 410 a.a.
• NCBI ID: WP_001161834.1
• Uniprot ID: -
• Organism: Escherichia coli strain LR-58-2
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4115384..4126616

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ83_RS20060 (VEE04_38140)	-	4115899..4117575 (+)	1677	WP_001323195.1	polysaccharide biosynthesis/export family protein	-
AABJ83_RS20065 (VEE04_38150)	kdsB	4117585..4118325 (+)	741	WP_000030749.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AABJ83_RS20070 (VEE04_38160)	-	4118322..4120349 (+)	2028	WP_000579512.1	capsular polysaccharide biosynthesis protein	-
AABJ83_RS20075 (VEE04_38170)	kpsS	4120384..4121616 (+)	1233	WP_001161834.1	capsular biosynthesis protein	Regulator
AABJ83_RS20080	-	4121862..4122971 (+)	1110	Protein_3925	IS3 family transposase	-
AABJ83_RS20085 (VEE04_38190)	-	4123189..4124766 (-)	1578	WP_000600936.1	hypothetical protein	-
AABJ83_RS20090 (VEE04_38200)	-	4124763..4125134 (-)	372	WP_001309753.1	capsular polysaccharide biosynthesis protein	-
AABJ83_RS20095 (VEE04_38210)	-	4125115..4125861 (-)	747	WP_000497656.1	glycosyltransferase family 2 protein	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 48905.37 Da
• Isoelectric Point: 10.0344

>NTDB_id=87443 AABJ83_RS20075 WP_001161834.1 4120384..4121616(+) (kpsS) [Escherichia coli strain LR-58-2]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWHEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDIKLFKKFRGYLLVKTQVNWVYYSNSNLCAYNSK
WAHVNLMDYN

Nucleotide

• Length: 1233 bp

>NTDB_id=87443 AABJ83_RS20075 WP_001161834.1 4120384..4121616(+) (kpsS) [Escherichia coli strain LR-58-2]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGATGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCCTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTAAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGCATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAATGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGGCTTAGGCGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACAATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGATTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCAGATATAAAACTGTTTAAGAAGT
TTCGCGGGTATTTATTGGTTAAGACGCAGGTTAATTGGGTTTATTATTCCAATAGTAATCTATGTGCATATAATAGTAAG
TGGGCTCATGTTAATTTAATGGATTATAATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.898	95.366	0.38