Detailed information NTG0874328

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: WJ054_RS06485
• Genome accession: NZ_CP149485
• Coordinates: 1274371..1276578 (-)
• Length: 735 a.a.
• NCBI ID: WP_158529513.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain STG643
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1269371..1281578

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WJ054_RS06455 (WJ054_06430)	-	1269767..1270588 (-)	822	WP_152873077.1	ZIP family metal transporter	-
WJ054_RS06460 (WJ054_06435)	-	1270606..1271394 (-)	789	WP_003054664.1	Nif3-like dinuclear metal center hexameric protein	-
WJ054_RS06465 (WJ054_06440)	-	1271384..1272070 (-)	687	WP_012767134.1	tRNA (adenine(22)-N(1))-methyltransferase TrmK	-
WJ054_RS06470 (WJ054_06445)	nth	1272151..1272807 (-)	657	WP_003054655.1	endonuclease III	-
WJ054_RS06475 (WJ054_06450)	-	1272804..1273487 (-)	684	WP_022554834.1	DnaD domain-containing protein	-
WJ054_RS06480 (WJ054_06455)	-	1273705..1274223 (-)	519	WP_003054649.1	adenine phosphoribosyltransferase	-
WJ054_RS06485 (WJ054_06460)	recJ	1274371..1276578 (-)	2208	WP_158529513.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
WJ054_RS06490 (WJ054_06465)	-	1276575..1277339 (-)	765	WP_049519776.1	SDR family oxidoreductase	-
WJ054_RS06495 (WJ054_06470)	rnz	1277339..1278268 (-)	930	WP_152873073.1	ribonuclease Z	-
WJ054_RS06500 (WJ054_06475)	-	1278283..1278918 (-)	636	WP_152873071.1	cystathionine beta-lyase	-
WJ054_RS06505 (WJ054_06480)	hflX	1278911..1280149 (-)	1239	WP_152873069.1	GTPase HflX	-
WJ054_RS06510 (WJ054_06485)	miaA	1280237..1281121 (-)	885	WP_003057843.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-
WJ054_RS06515 (WJ054_06490)	-	1281254..1281430 (+)	177	WP_003057835.1	DUF3042 family protein	-

Sequence

Protein

• Length: 735 a.a.
• Molecular weight: 82119.93 Da
• Isoelectric Point: 4.6678

>NTDB_id=874328 WJ054_RS06485 WP_158529513.1 1274371..1276578(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYDRGIRTEEALDEFLTADLSQLHDPYLLHDMAKAVPRIRQAIEE
GERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRFTDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQ
EQEVDVIVTDHHSLPEELPEAFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLTMLKHTERVGLQELMSLSSIDLDQFTEDAVGFQIAPQLNALGRLDDPNPAIELLTGFDDQEAQAIALMIKEKN
EERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIVAGRIMEAIGQTVIVLAIDNGFAKGSARSLEAINIFEALSG
NRDLFTAFGGHAGAAGMTLPVDNLEALSDLLCQFVIERGLDQTAKNTLTIDERLSLEDLSLDTLKSLDKLAPYGMDHPKP
IFYVKDIKVSQARTMGQDQSHLKFKVSQGKTSFDVLAFGQGSQLQDFQQATGLELAVTLSVNHWNGNTSLQLMLVDARVE
GVQLLDLRSKTAKLPEGIPTIEEDPKATVIVIKELPESFKDWRHQFADRTFDAIYFKNQIKHPYYLTGFGSREQFAKLYK
TIYQFPEFDVRHKLTDLSRYLNIDKLLLIKLIQIFEELAFVTIEDGLMTVNPQAQKRDISESRIYQELKELVKFQEIMAL
ASPQEMYDYLVNSKP

Nucleotide

• Length: 2208 bp

>NTDB_id=874328 WJ054_RS06485 WP_158529513.1 1274371..1276578(-) (recJ) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
ATGATTAAATCCAAATATAGCTGGAAAATAAAAGACAAGAAGCCAGATGATGGCTTCTTTAAGCTAGCAAAGACAAAAGG
TCTAACCCAGACCGCCGCTCAGTTGATTTATGATCGAGGGATAAGGACTGAAGAAGCCTTAGATGAGTTTTTAACAGCGG
ACTTGTCTCAACTGCATGATCCTTACTTGCTACATGACATGGCAAAAGCTGTGCCAAGAATTCGTCAAGCTATTGAAGAG
GGCGAACGAATTCTCATTTACGGCGACTATGATGCTGATGGCATGACGTCGGCTTCTATTGTCAAAGAAACCCTAGACAT
GATGGGAGCAGAGCCTTTGGTTTATCTTCCCAACCGCTTTACAGATGGCTATGGCCCCAACCAGAGCGTCTATAAATATT
TTATTGAGCAGGAAGCTGTGTCCCTAATTATCACGGTTGATAATGGCGTGGCCGGACATGAAGCGATTAGATATGCTCAA
GAACAGGAAGTTGATGTCATTGTAACTGACCATCATAGCCTGCCTGAAGAATTGCCAGAAGCCTTTGCCATCATTCACCC
TGAGCATCCTGATGCTGATTATCCCTTTAAACACTTAGCTGGCTGTGGCGTTGCCTTTAAATTGGCAACAGCTTTGCTAG
AAAGTTTACCAACAGACTGTCTAGACTTGGTAGCTATTGGAACCATTGCTGATATGGTAAGCTTGACAGGTGAAAACCGT
GTCTTGGTCAAAAATGGCTTGACCATGCTAAAACACACTGAAAGAGTGGGGTTGCAGGAACTGATGTCCTTGTCTTCTAT
TGATTTGGACCAATTTACGGAAGATGCTGTTGGGTTTCAGATTGCTCCCCAGTTGAATGCCTTAGGTCGTTTAGATGATC
CTAATCCAGCTATTGAGCTACTGACGGGCTTTGATGATCAAGAAGCCCAAGCGATTGCCTTGATGATTAAGGAAAAAAAT
GAAGAGCGTAAGGCTTTGGTCCAAGACATTTTTGATCAAGCGATGGCTATGGTTGATCCTCAAAAACCAGTTCAAGTCTT
AGCTCAAGCTGGTTGGCATCCAGGTGTGCTAGGTATTGTAGCGGGTCGTATTATGGAAGCCATTGGACAGACGGTCATTG
TCTTAGCTATTGATAACGGTTTTGCGAAAGGCTCGGCCAGAAGTTTAGAGGCCATTAATATATTTGAAGCCTTAAGTGGG
AATCGTGATCTTTTTACAGCTTTCGGTGGACATGCTGGTGCAGCTGGGATGACTTTGCCCGTGGATAATTTAGAAGCTTT
ATCGGACTTGCTTTGTCAGTTTGTGATAGAACGTGGCTTAGATCAGACTGCTAAAAATACGTTAACTATTGATGAAAGGC
TGTCTTTGGAGGATCTTAGTCTTGATACTTTAAAGAGTTTGGACAAACTAGCCCCCTATGGGATGGATCATCCTAAGCCA
ATCTTTTATGTTAAGGATATTAAAGTTAGTCAAGCGCGTACCATGGGTCAAGACCAGAGTCATCTTAAATTCAAAGTCAG
CCAGGGTAAGACCTCCTTTGATGTTCTGGCTTTTGGTCAAGGAAGCCAACTACAAGACTTTCAACAAGCTACTGGTTTAG
AGTTAGCGGTAACTTTATCCGTCAACCACTGGAACGGCAATACCAGCCTCCAACTAATGTTGGTTGACGCTCGTGTTGAA
GGGGTGCAGTTGCTTGATTTACGGTCAAAAACAGCTAAACTACCCGAAGGTATTCCGACGATTGAGGAAGATCCCAAAGC
AACAGTTATTGTTATTAAGGAGCTTCCGGAATCTTTTAAAGACTGGCGTCATCAGTTCGCTGATAGAACCTTCGATGCCA
TTTATTTTAAAAATCAGATTAAACACCCCTATTACCTAACAGGTTTTGGAAGTCGTGAACAGTTTGCTAAACTCTATAAA
ACCATTTACCAATTTCCAGAATTTGATGTGCGTCATAAATTGACTGACTTGAGTCGCTACTTAAACATTGACAAACTTTT
ATTGATTAAGCTCATTCAGATTTTTGAAGAGCTAGCTTTTGTGACGATTGAAGATGGCCTGATGACAGTTAACCCACAAG
CGCAAAAGCGAGATATTTCTGAGAGTCGTATCTACCAAGAGCTAAAAGAACTCGTGAAGTTCCAAGAAATCATGGCCTTG
GCCAGTCCTCAAGAAATGTATGATTATTTGGTCAATTCGAAACCATAA

Domains

Predicted by InterProScan.

• DHH family (DHH) (83-228)

• DHHA1 domain (DHHA1) (317-435)

• RecJ OB domain (RecJ_OB) (450-556)

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (587-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	64.054	100	0.645
recJ	Bacillus subtilis subsp. subtilis str. 168	36.108	100	0.384