Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   WJ054_RS06420 Genome accession   NZ_CP149485
Coordinates   1263961..1264440 (-) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae subsp. equisimilis strain STG643     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1258961..1269440
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WJ054_RS06400 (WJ054_06375) - 1259260..1259601 (-) 342 WP_003054176.1 hypothetical protein -
  WJ054_RS06405 (WJ054_06380) - 1259779..1261431 (+) 1653 WP_065354957.1 NFACT family protein -
  WJ054_RS06410 (WJ054_06385) - 1261494..1262741 (-) 1248 WP_084916566.1 lipopolysaccharide assembly protein LapB -
  WJ054_RS06415 (WJ054_06390) - 1262731..1263912 (-) 1182 WP_065354958.1 AI-2E family transporter -
  WJ054_RS06420 (WJ054_06395) mutX 1263961..1264440 (-) 480 WP_003058929.1 8-oxo-dGTP diphosphatase Machinery gene
  WJ054_RS06425 (WJ054_06400) - 1264636..1264827 (+) 192 WP_003058922.1 hypothetical protein -
  WJ054_RS06430 (WJ054_06405) - 1264915..1265640 (-) 726 WP_022554827.1 CPBP family intramembrane glutamic endopeptidase -
  WJ054_RS06435 (WJ054_06410) rfbB 1265829..1266872 (-) 1044 WP_044565428.1 dTDP-glucose 4,6-dehydratase -
  WJ054_RS06440 (WJ054_06415) - 1267116..1267709 (-) 594 WP_003057688.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  WJ054_RS06445 (WJ054_06420) rfbA 1267709..1268578 (-) 870 WP_046177098.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=874327 WJ054_RS06420 WP_003058929.1 1263961..1264440(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=874327 WJ054_RS06420 WP_003058929.1 1263961..1264440(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686