Detailed information    

insolico Bioinformatically predicted

Overview

Name   comE/blpR   Type   Regulator
Locus tag   WJ054_RS02805 Genome accession   NZ_CP149485
Coordinates   526170..526388 (+) Length   72 a.a.
NCBI ID   WP_072135532.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain STG643     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 521170..531388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WJ054_RS02775 (WJ054_02770) - 522176..522751 (+) 576 WP_003054351.1 uracil-DNA glycosylase family protein -
  WJ054_RS02780 (WJ054_02775) ybeY 522910..523407 (+) 498 WP_003054373.1 rRNA maturation RNase YbeY -
  WJ054_RS02785 (WJ054_02780) - 523388..523795 (+) 408 WP_003054389.1 diacylglycerol kinase family protein -
  WJ054_RS02790 (WJ054_02785) era 523916..524812 (+) 897 WP_002985743.1 GTPase Era -
  WJ054_RS02795 (WJ054_02790) - 524833..525309 (+) 477 WP_002993018.1 NUDIX hydrolase -
  WJ054_RS02800 (WJ054_02795) - 525618..525869 (-) 252 WP_080589767.1 hypothetical protein -
  WJ054_RS02805 (WJ054_02800) comE/blpR 526170..526388 (+) 219 WP_072135532.1 LytTR family transcriptional regulator DNA-binding domain-containing protein Regulator
  WJ054_RS02810 (WJ054_02805) - 526585..528382 (-) 1798 Protein_496 peptide cleavage/export ABC transporter -
  WJ054_RS02815 (WJ054_02810) - 528680..528907 (+) 228 WP_022554332.1 Blp family class II bacteriocin -
  WJ054_RS02820 (WJ054_02815) - 528956..529273 (+) 318 WP_002994587.1 hypothetical protein -
  WJ054_RS02825 (WJ054_02820) - 529393..530477 (+) 1085 Protein_499 IS3 family transposase -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 8666.13 Da        Isoelectric Point: 10.5045

>NTDB_id=874299 WJ054_RS02805 WP_072135532.1 526170..526388(+) (comE/blpR) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
MVLYSTRERIEFYGELSEIVKQEPRLFQCHRSFVVNPYNISSIQRLERKVYLKKRFILSSIKAKSYCSKRSS

Nucleotide


Download         Length: 219 bp        

>NTDB_id=874299 WJ054_RS02805 WP_072135532.1 526170..526388(+) (comE/blpR) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
TTGGTTCTTTATTCTACTAGAGAAAGGATTGAATTTTATGGGGAGTTATCTGAAATCGTTAAGCAAGAACCAAGATTATT
TCAATGCCATCGATCATTTGTTGTTAATCCCTACAATATATCTTCAATACAACGATTAGAACGTAAGGTTTATTTAAAAA
AACGGTTCATCTTGTCTAGTATCAAGGCTAAAAGTTACTGCTCTAAAAGAAGCAGTTGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(3-55)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

56.604

73.611

0.417