Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   RDJ18_RS14240 Genome accession   NZ_CP133442
Coordinates   2813596..2814483 (-) Length   295 a.a.
NCBI ID   WP_000143418.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA191     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2808596..2819483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RDJ18_RS14220 (RDJ18_14220) - 2809384..2809689 (-) 306 WP_000677987.1 hypothetical protein -
  RDJ18_RS14225 (RDJ18_14225) - 2810046..2810720 (+) 675 WP_001105999.1 IS6-like element IS257 family transposase -
  RDJ18_RS14230 (RDJ18_14230) - 2810748..2812736 (-) 1989 WP_000776743.1 ABC transporter permease -
  RDJ18_RS14235 (RDJ18_14235) - 2812733..2813488 (-) 756 WP_000923764.1 ABC transporter ATP-binding protein -
  RDJ18_RS14240 (RDJ18_14240) braS 2813596..2814483 (-) 888 WP_000143418.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  RDJ18_RS14245 (RDJ18_14245) braR 2814494..2815159 (-) 666 WP_000697878.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  RDJ18_RS14250 (RDJ18_14250) - 2815185..2815385 (-) 201 WP_000604727.1 hypothetical protein -
  RDJ18_RS14255 (RDJ18_14255) - 2815583..2817007 (+) 1425 WP_000953739.1 alkaline phosphatase -
  RDJ18_RS14775 - 2817067..2817168 (-) 102 WP_000731972.1 SE2200 family small protein -
  RDJ18_RS14265 (RDJ18_14265) - 2817290..2817745 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  RDJ18_RS14270 (RDJ18_14270) - 2817990..2818751 (-) 762 WP_000323448.1 alpha/beta hydrolase family protein -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 34105.41 Da        Isoelectric Point: 5.8962

>NTDB_id=874150 RDJ18_RS14240 WP_000143418.1 2813596..2814483(-) (braS) [Staphylococcus aureus strain SA191]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQFNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=874150 RDJ18_RS14240 WP_000143418.1 2813596..2814483(-) (braS) [Staphylococcus aureus strain SA191]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAATTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATTCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(191-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99