Detailed information NTG0873941

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: WDR05_RS18045
• Genome accession: NZ_CP149444
• Coordinates: 3471680..3474553 (-)
• Length: 957 a.a.
• NCBI ID: WP_003228057.1
• Uniprot ID: A0ABU0VAU0
• Organism: Bacillus subtilis strain HC-9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3466680..3479553

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WDR05_RS18015 (WDR05_17995)	yvlD	3467861..3468220 (-)	360	WP_003228066.1	phage holin family protein	-
WDR05_RS18020 (WDR05_18000)	yvlC	3468222..3468419 (-)	198	WP_128422426.1	PspC domain-containing protein	-
WDR05_RS18025 (WDR05_18005)	yvlB	3468424..3469521 (-)	1098	WP_128422427.1	DUF4097 domain-containing protein	-
WDR05_RS18030 (WDR05_18010)	yvlA	3469546..3469872 (-)	327	WP_032726939.1	protein YvlA	-
WDR05_RS18035 (WDR05_18015)	-	3470090..3470320 (+)	231	WP_003235419.1	hypothetical protein	-
WDR05_RS18040 (WDR05_18020)	hag	3470519..3471340 (-)	822	WP_029318328.1	flagellin Hag	-
WDR05_RS18045 (WDR05_18025)	uvrA	3471680..3474553 (-)	2874	WP_003228057.1	excinuclease ABC subunit UvrA	Machinery gene
WDR05_RS18050 (WDR05_18030)	uvrB	3474561..3476546 (-)	1986	WP_003228054.1	excinuclease ABC subunit UvrB	Machinery gene
WDR05_RS18055 (WDR05_18035)	csbA	3476732..3476962 (-)	231	WP_003228053.1	CsbA family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106032.21 Da
• Isoelectric Point: 6.2081

>NTDB_id=873941 WDR05_RS18045 WP_003228057.1 3471680..3474553(-) (uvrA) [Bacillus subtilis strain HC-9]
MAMDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIVSGR
KGAHVKVLEQIRKQGYVRVRIDGEMAELSDDIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
EEELMFSEHHACPHCGFSIGELEPRLFSFNSPFGACPTCDGLGMKLEVDADLVIPNQDLSLKENAVAPWTPISSQYYPQL
LEAVCTHYGIDMDVPVKDLPKHQLDKVLYGSGDDLIYFRYENDFGQIREGEIQFEGVLRNIERRYKETGSDFIREQMEQY
MSQKSCPTCKGYRLKKEALAVLIDGRHIGKITELSVADALAFFKDLTLSEKDMQIANLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGQVISAGTPEEVMEDPNSLTGSYLSGKKFIPLPPERRKPDGRYIEIKGASENNLKKVNAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLYDVGLGYITLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPEEITEVEESYTGRYLKPVIERDKTRMKSLLKAKETATS

Nucleotide

• Length: 2874 bp

>NTDB_id=873941 WDR05_RS18045 WP_003228057.1 3471680..3474553(-) (uvrA) [Bacillus subtilis strain HC-9]
ATGGCTATGGATCGGATAGAGGTGAAGGGAGCCAGGGCGCATAACCTGAAAAATATAGATGTAACGATTCCGAGAGATCA
GCTTGTCGTTGTCACGGGTTTGTCCGGATCAGGTAAATCCTCCCTTGCCTTTGACACGATATATGCTGAAGGACAGAGAC
GGTATGTCGAGTCGCTGTCTGCTTATGCCCGCCAGTTTTTAGGGCAAATGGATAAGCCTGATGTGGATGCAATTGAGGGG
CTCTCTCCCGCCATCAGCATTGATCAGAAAACAACAAGCCGTAATCCGAGGTCTACTGTCGGTACGGTAACTGAGATTTA
TGATTATCTGCGTCTTTTATATGCGAGAGTAGGGAAGCCTCATTGTCCGGAGCACGGAATTGAGATTACATCCCAGACCA
TCGAGCAAATGGTGGACAGAATTCTGGAATACCCGGAACGGACGAAGCTTCAGGTGCTGGCGCCGATTGTCTCAGGCCGA
AAAGGCGCTCATGTCAAAGTGCTTGAACAGATTAGAAAACAAGGCTATGTCAGAGTCAGAATTGACGGCGAGATGGCTGA
GCTTTCTGACGATATCGAATTAGAAAAGAATAAGAAGCATTCCATTGAGGTTGTCATTGACCGGATTGTCGTGAAAGAAG
GAGTGGCAGCCCGGCTATCAGATTCATTGGAAACGGCGCTCCGTTTAGGTGAAGGACGGGTTATGATCGATGTCATCGGT
GAGGAAGAGCTGATGTTCAGCGAGCATCATGCCTGTCCGCACTGCGGATTTTCAATTGGTGAGCTTGAGCCGCGTCTGTT
TTCGTTTAACAGTCCGTTCGGGGCGTGTCCGACGTGTGACGGTCTCGGAATGAAGCTTGAAGTGGATGCCGATCTTGTCA
TCCCCAATCAAGATTTGTCATTGAAGGAGAATGCGGTCGCCCCTTGGACACCGATCAGCTCACAATATTATCCTCAGCTG
CTTGAGGCAGTCTGCACCCACTACGGGATTGATATGGATGTGCCGGTCAAAGATTTGCCGAAGCATCAACTGGATAAAGT
GCTGTACGGCAGCGGAGATGACCTGATTTATTTCCGATATGAAAATGATTTTGGACAAATCCGCGAAGGTGAAATTCAAT
TTGAAGGCGTATTGCGCAACATTGAAAGACGCTATAAGGAGACAGGCTCCGATTTCATACGTGAGCAAATGGAGCAGTAT
ATGTCTCAGAAGTCTTGTCCAACGTGCAAAGGCTATCGGTTAAAGAAAGAGGCGCTTGCCGTACTGATTGACGGCCGCCA
CATCGGAAAAATTACCGAGCTGTCTGTCGCCGACGCACTTGCCTTTTTCAAAGACCTTACCCTTTCTGAGAAGGATATGC
AGATCGCCAATTTGATTTTGCGCGAAATTGTGGAGCGCTTAAGCTTTCTGGACAAAGTCGGCCTCGATTACCTGACATTG
AGCAGGGCAGCGGGTACATTGTCCGGGGGAGAGGCGCAGCGCATCAGGCTGGCGACACAAATTGGCTCGCGTTTATCCGG
TGTGCTTTATATTTTAGATGAGCCGTCTATCGGTCTGCATCAGCGTGATAACGACCGCTTGATCAGCGCTCTGAAAAATA
TGAGAGACCTCGGGAACACGCTGATTGTTGTCGAACATGATGAGGACACGATGATGGCAGCAGATTATTTAATAGACATT
GGACCGGGAGCCGGCATTCACGGCGGACAGGTGATATCTGCGGGTACGCCGGAAGAAGTGATGGAAGATCCAAACTCATT
AACGGGCAGCTATTTATCAGGGAAAAAGTTTATCCCATTGCCTCCTGAAAGAAGAAAGCCGGACGGACGTTACATTGAAA
TTAAAGGTGCTTCAGAAAACAACCTGAAAAAAGTGAATGCCAAGTTCCCGCTTGGGACGTTTACAGCAGTTACAGGTGTT
TCCGGTTCAGGAAAGAGTACACTCGTTAATGAAATTTTGCATAAGGCGCTGGCGCAAAAGCTTCATAAAGCGAAAGCGAA
GCCCGGCAGCCATAAAGAGATTAAAGGTTTGGATCATTTAGATAAAGTCATTGACATTGACCAGGCGCCAATCGGAAGAA
CGCCGAGATCCAACCCTGCGACATACACCGGTGTATTTGATGACATTCGTGATGTATTCGCGCAGACAAATGAAGCGAAG
GTCCGCGGCTATAAAAAAGGCCGTTTCAGCTTCAACGTGAAGGGCGGACGATGTGAAGCCTGCCGCGGAGACGGGATTAT
TAAAATTGAAATGCACTTCCTTCCTGACGTATACGTTCCATGCGAGGTGTGTCACGGCAAACGCTATAACCGTGAAACGC
TTGAAGTGACGTACAAAGGAAAAAGCATCTCTGATGTGCTTGATATGACGGTTGAAGATGCTCTTTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTCCAAACCCTTTATGATGTTGGTTTAGGTTATATTACGCTCGGCCAGCCGGCGACGAC
CTTGTCAGGCGGAGAAGCGCAGCGCGTGAAGCTCGCGTCAGAGCTGCACAAACGCTCAACCGGACGCACGCTCTACATTT
TAGATGAGCCGACGACAGGTTTGCATGTCGACGATATCGCCAGGCTTCTTGTCGTGCTGCAACGGTTGGTAGACAACGGA
GACACTGTACTGGTTATTGAGCACAACCTTGATATCATTAAGACGGCCGATTACATTGTGGATTTGGGCCCGGAAGGCGG
AGCCGGAGGCGGAACCATTGTCGCGTCTGGAACGCCTGAGGAAATCACTGAAGTGGAAGAATCGTATACAGGCCGTTATT
TGAAGCCTGTTATCGAACGTGACAAAACACGCATGAAATCGCTCTTGAAAGCGAAAGAAACAGCTACATCTTAA

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (132-238)

• ABC transporter (ABC_tran) (622-858)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	69.198	97.701	0.676
uvrA	Streptococcus pneumoniae TIGR4	69.198	97.701	0.676
uvrA	Streptococcus pneumoniae D39	69.198	97.701	0.676