Detailed information NTG0873906

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: Q7Q33_RS19370
• Genome accession: NZ_CP133412
• Coordinates: 3643657..3644802 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain KK001
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3638657..3649802

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7Q33_RS19345 (Q7Q33_19325)	albF	3638673..3639953 (+)	1281	WP_003242974.1	M16 family metallopeptidase	-
Q7Q33_RS19350 (Q7Q33_19330)	albG	3639950..3640651 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
Q7Q33_RS19355 (Q7Q33_19335)	ywhL	3640657..3642033 (-)	1377	WP_003244415.1	YncE family protein	-
Q7Q33_RS19360 (Q7Q33_19340)	ywhK	3642072..3643427 (-)	1356	WP_003227552.1	YncE family protein	-
Q7Q33_RS19365 (Q7Q33_19345)	-	3643424..3643654 (-)	231	WP_009968328.1	hypothetical protein	-
Q7Q33_RS19370 (Q7Q33_19350)	rapF	3643657..3644802 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
Q7Q33_RS19375 (Q7Q33_19355)	phrF	3644786..3644905 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
Q7Q33_RS19380 (Q7Q33_19360)	ywhH	3645004..3645477 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
Q7Q33_RS19385 (Q7Q33_19365)	speB	3645509..3646381 (-)	873	WP_003227545.1	agmatinase	-
Q7Q33_RS19390 (Q7Q33_19370)	speE	3646442..3647272 (-)	831	WP_003227543.1	spermidine synthase	-
Q7Q33_RS19395 (Q7Q33_19375)	pbpG	3647474..3649549 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=873906 Q7Q33_RS19370 WP_003227549.1 3643657..3644802(+) (rapF) [Bacillus subtilis strain KK001]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=873906 Q7Q33_RS19370 WP_003227549.1 3643657..3644802(+) (rapF) [Bacillus subtilis strain KK001]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572