Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | K6K00_RS13140 | Genome accession | NZ_AP024628 |
| Coordinates | 2529759..2530796 (-) | Length | 345 a.a. |
| NCBI ID | WP_009967727.1 | Uniprot ID | A0AAE2SM96 |
| Organism | Bacillus subtilis strain BEST3145 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2524759..2535796
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6K00_RS13090 (BsBEST3145_25380) | tasA | 2524857..2525642 (-) | 786 | WP_004398632.1 | biofilm matrix protein TasA | - |
| K6K00_RS13095 (BsBEST3145_25390) | sipW | 2525706..2526278 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| K6K00_RS13100 (BsBEST3145_25400) | tapA | 2526262..2527023 (-) | 762 | WP_004399106.1 | amyloid fiber anchoring/assembly protein TapA | - |
| K6K00_RS13105 (BsBEST3145_25410) | yqzG | 2527295..2527621 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| K6K00_RS13110 (BsBEST3145_25420) | spoIITA | 2527663..2527842 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| K6K00_RS13115 (BsBEST3145_25430) | comGG | 2527913..2528287 (-) | 375 | WP_003230170.1 | ComG operon protein ComGG | Machinery gene |
| K6K00_RS13120 (BsBEST3145_25440) | comGF | 2528288..2528671 (-) | 384 | WP_003230168.1 | ComG operon protein ComGF | Machinery gene |
| K6K00_RS13125 (BsBEST3145_25450) | comGE | 2528697..2529044 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| K6K00_RS13130 (BsBEST3145_25460) | comGD | 2529028..2529459 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| K6K00_RS13135 (BsBEST3145_25470) | comGC | 2529449..2529745 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| K6K00_RS13140 (BsBEST3145_25480) | comGB | 2529759..2530796 (-) | 1038 | WP_009967727.1 | comG operon protein ComGB | Machinery gene |
| K6K00_RS13145 (BsBEST3145_25490) | comGA | 2530783..2531853 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| K6K00_RS13150 (BsBEST3145_25500) | corA | 2532265..2533218 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| K6K00_RS13155 (BsBEST3145_25510) | yqhB | 2533361..2534689 (+) | 1329 | WP_009967730.1 | hemolysin family protein | - |
| K6K00_RS13160 (BsBEST3145_25520) | rsbRD | 2534742..2535578 (-) | 837 | WP_004398754.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39762.26 Da Isoelectric Point: 9.6257
>NTDB_id=87379 K6K00_RS13140 WP_009967727.1 2529759..2530796(-) (comGB) [Bacillus subtilis strain BEST3145]
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSLFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWLLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDSVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSLFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=87379 K6K00_RS13140 WP_009967727.1 2529759..2530796(-) (comGB) [Bacillus subtilis strain BEST3145]
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCTTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTTGTTAAAGGATCAAGCCAGGTTATTAAAGAGGCTCGGTGAAATGACTGCGGGCGG
ATATACACTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATTCGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCAATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTAAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCTTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
93.623 |
0.936 |