Detailed information NTG0873722

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: RCI26_RS27060
• Genome accession: NZ_CP133375
• Coordinates: 5202091..5203218 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470754.1
• Uniprot ID: A0A9W3P6A6
• Organism: Bacillus thuringiensis serovar tenebrionis strain ten BI 256-82/CM3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5197091..5208218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RCI26_RS27050 (RCI26_27050)	gyrA	5197569..5200040 (-)	2472	WP_001282868.1	DNA gyrase subunit A	-
RCI26_RS27055 (RCI26_27055)	gyrB	5200129..5202051 (-)	1923	WP_000435979.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
RCI26_RS27060 (RCI26_27060)	recF	5202091..5203218 (-)	1128	WP_000470754.1	DNA replication/repair protein RecF	Machinery gene
RCI26_RS27065 (RCI26_27065)	yaaA	5203231..5203443 (-)	213	WP_000680510.1	S4 domain-containing protein YaaA	-
RCI26_RS27070 (RCI26_27070)	dnaN	5203571..5204716 (-)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
RCI26_RS27075 (RCI26_27075)	dnaA	5204895..5206235 (-)	1341	WP_000428018.1	chromosomal replication initiator protein DnaA	-
RCI26_RS27080 (RCI26_27080)	rpmH	5206800..5206934 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
RCI26_RS27085 (RCI26_27085)	rnpA	5207011..5207358 (+)	348	WP_000726621.1	ribonuclease P protein component	-
RCI26_RS27090 (RCI26_27090)	spoIIIJ	5207411..5208178 (+)	768	WP_000727741.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43318.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=873722 RCI26_RS27060 WP_000470754.1 5202091..5203218(-) (recF) [Bacillus thuringiensis serovar tenebrionis strain ten BI 256-82/CM3]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEEFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPIYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=873722 RCI26_RS27060 WP_000470754.1 5202091..5203218(-) (recF) [Bacillus thuringiensis serovar tenebrionis strain ten BI 256-82/CM3]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCACAAGGGAAAACAAACTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGAGTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTATATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGCGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGGCAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTAATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGCTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.033	98.133	0.648