Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RCI26_RS20640 Genome accession   NZ_CP133375
Coordinates   3993582..3993758 (-) Length   58 a.a.
NCBI ID   WP_001003335.1    Uniprot ID   A0A9W5VN58
Organism   Bacillus thuringiensis serovar tenebrionis strain ten BI 256-82/CM3     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3988582..3998758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RCI26_RS20620 (RCI26_20620) - 3989362..3990108 (-) 747 WP_000966119.1 YjbA family protein -
  RCI26_RS20625 (RCI26_20625) - 3990252..3991040 (-) 789 WP_000538198.1 DUF2268 domain-containing protein -
  RCI26_RS20630 (RCI26_20630) fabF 3991148..3992386 (-) 1239 WP_000412645.1 beta-ketoacyl-ACP synthase II -
  RCI26_RS20635 (RCI26_20635) fabH 3992418..3993350 (-) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  RCI26_RS20640 (RCI26_20640) comZ 3993582..3993758 (-) 177 WP_001003335.1 ComZ family protein Regulator
  RCI26_RS20645 (RCI26_20645) - 3993813..3994685 (-) 873 WP_000486171.1 NAD(P)-dependent oxidoreductase -
  RCI26_RS20650 (RCI26_20650) - 3994715..3995449 (-) 735 WP_000028706.1 hypothetical protein -
  RCI26_RS20655 (RCI26_20655) - 3995606..3995788 (+) 183 WP_001211116.1 YjzD family protein -
  RCI26_RS20660 (RCI26_20660) clpC 3995827..3998427 (-) 2601 WP_000365378.1 ATP-dependent chaperone ClpB Regulator

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6575.71 Da        Isoelectric Point: 4.4184

>NTDB_id=873711 RCI26_RS20640 WP_001003335.1 3993582..3993758(-) (comZ) [Bacillus thuringiensis serovar tenebrionis strain ten BI 256-82/CM3]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQQ

Nucleotide


Download         Length: 177 bp        

>NTDB_id=873711 RCI26_RS20640 WP_001003335.1 3993582..3993758(-) (comZ) [Bacillus thuringiensis serovar tenebrionis strain ten BI 256-82/CM3]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCGCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAACAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586