Detailed information NTG0873674

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: RCI27_RS27050
• Genome accession: NZ_CP133369
• Coordinates: 5202075..5203202 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470754.1
• Uniprot ID: A0A9W3P6A6
• Organism: Bacillus thuringiensis serovar tenebrionis strain ten BI 256-82
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5197075..5208202

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RCI27_RS27040 (RCI27_27040)	gyrA	5197553..5200024 (-)	2472	WP_001282868.1	DNA gyrase subunit A	-
RCI27_RS27045 (RCI27_27045)	gyrB	5200113..5202035 (-)	1923	WP_000435979.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
RCI27_RS27050 (RCI27_27050)	recF	5202075..5203202 (-)	1128	WP_000470754.1	DNA replication/repair protein RecF	Machinery gene
RCI27_RS27055 (RCI27_27055)	yaaA	5203215..5203427 (-)	213	WP_000680510.1	S4 domain-containing protein YaaA	-
RCI27_RS27060 (RCI27_27060)	dnaN	5203555..5204700 (-)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
RCI27_RS27065 (RCI27_27065)	dnaA	5204879..5206219 (-)	1341	WP_000428018.1	chromosomal replication initiator protein DnaA	-
RCI27_RS27070 (RCI27_27070)	rpmH	5206784..5206918 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
RCI27_RS27075 (RCI27_27075)	rnpA	5206995..5207342 (+)	348	WP_000726621.1	ribonuclease P protein component	-
RCI27_RS27080 (RCI27_27080)	spoIIIJ	5207395..5208162 (+)	768	WP_000727741.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43318.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=873674 RCI27_RS27050 WP_000470754.1 5202075..5203202(-) (recF) [Bacillus thuringiensis serovar tenebrionis strain ten BI 256-82]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEEFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPIYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=873674 RCI27_RS27050 WP_000470754.1 5202075..5203202(-) (recF) [Bacillus thuringiensis serovar tenebrionis strain ten BI 256-82]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCACAAGGGAAAACAAACTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGAGTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTATATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGCGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGGCAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTAATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGCTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.033	98.133	0.648