Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | K6K00_RS06000 | Genome accession | NZ_AP024628 |
| Coordinates | 1178363..1179316 (+) | Length | 317 a.a. |
| NCBI ID | WP_003245494.1 | Uniprot ID | A0AAE2SG99 |
| Organism | Bacillus subtilis strain BEST3145 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1173363..1184316
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6K00_RS05975 (BsBEST3145_11350) | argF | 1175195..1176154 (+) | 960 | WP_003232980.1 | ornithine carbamoyltransferase | - |
| K6K00_RS05980 (BsBEST3145_11360) | yjzC | 1176240..1176419 (+) | 180 | WP_003245356.1 | YjzC family protein | - |
| K6K00_RS05985 (BsBEST3145_11370) | yjzD | 1176465..1176650 (-) | 186 | WP_003245236.1 | YjzD family protein | - |
| K6K00_RS05990 (BsBEST3145_11380) | - | 1176899..1177633 (+) | 735 | WP_003245223.1 | hypothetical protein | - |
| K6K00_RS05995 (BsBEST3145_11390) | - | 1177715..1178272 (+) | 558 | WP_003232974.1 | hypothetical protein | - |
| K6K00_RS06000 (BsBEST3145_11400) | med | 1178363..1179316 (+) | 954 | WP_003245494.1 | transcriptional regulator Med | Regulator |
| K6K00_RS06005 (BsBEST3145_11410) | comZ | 1179331..1179522 (+) | 192 | WP_003224559.1 | ComG operon transcriptional repressor ComZ | Regulator |
| K6K00_RS06010 (BsBEST3145_11420) | yjzB | 1179552..1179791 (-) | 240 | WP_003232972.1 | spore coat protein YjzB | - |
| K6K00_RS06015 (BsBEST3145_11430) | fabH | 1179956..1180894 (+) | 939 | WP_003232971.1 | beta-ketoacyl-ACP synthase III | - |
| K6K00_RS06020 (BsBEST3145_11440) | fabF | 1180917..1182158 (+) | 1242 | WP_014479438.1 | beta-ketoacyl-ACP synthase II | - |
| K6K00_RS06025 (BsBEST3145_11450) | yjaZ | 1182234..1183019 (+) | 786 | WP_014479439.1 | DUF2268 domain-containing protein | - |
| K6K00_RS06030 (BsBEST3145_11460) | appD | 1183211..1184197 (+) | 987 | WP_003232965.1 | oligopeptide ABC transporter ATP-binding protein AppD | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35310.80 Da Isoelectric Point: 4.5457
>NTDB_id=87353 K6K00_RS06000 WP_003245494.1 1178363..1179316(+) (med) [Bacillus subtilis strain BEST3145]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE
Nucleotide
Download Length: 954 bp
>NTDB_id=87353 K6K00_RS06000 WP_003245494.1 1178363..1179316(+) (med) [Bacillus subtilis strain BEST3145]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |