Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RCG17_RS19335 Genome accession   NZ_CP133268
Coordinates   3809772..3809972 (+) Length   66 a.a.
NCBI ID   WP_308171713.1    Uniprot ID   -
Organism   Neobacillus sp. PS3-12     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3804772..3814972
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RCG17_RS19315 (RCG17_19315) clpB 3804858..3807456 (+) 2599 Protein_3702 ATP-dependent chaperone ClpB -
  RCG17_RS19320 (RCG17_19320) - 3807705..3807887 (-) 183 WP_308171710.1 YjzD family protein -
  RCG17_RS19325 (RCG17_19325) - 3808074..3808808 (+) 735 WP_308171711.1 hydrolase -
  RCG17_RS19330 (RCG17_19330) - 3808880..3809692 (+) 813 WP_308171712.1 hypothetical protein -
  RCG17_RS19335 (RCG17_19335) comZ 3809772..3809972 (+) 201 WP_308171713.1 ComZ family protein Regulator
  RCG17_RS19340 (RCG17_19340) - 3810676..3812613 (+) 1938 WP_308171714.1 asparagine synthase-related protein -
  RCG17_RS19345 (RCG17_19345) - 3812628..3812753 (+) 126 WP_308171715.1 paeninodin family lasso peptide -
  RCG17_RS19350 (RCG17_19350) - 3812835..3813770 (+) 936 WP_308171716.1 aldolase -
  RCG17_RS19355 (RCG17_19355) - 3813767..3814063 (+) 297 WP_308171717.1 lasso peptide biosynthesis PqqD family chaperone -
  RCG17_RS19360 (RCG17_19360) - 3814094..3814555 (+) 462 WP_308171718.1 lasso peptide biosynthesis B2 protein -

Sequence

Protein


Download         Length: 66 a.a.        Molecular weight: 7751.95 Da        Isoelectric Point: 4.2702

>NTDB_id=873108 RCG17_RS19335 WP_308171713.1 3809772..3809972(+) (comZ) [Neobacillus sp. PS3-12]
MNTPDKSMEFMQIAMKYFPQAKEQLDKAGVELSFDVIQPFMELFTKVMQEAYELGREEALKEVKQD

Nucleotide


Download         Length: 201 bp        

>NTDB_id=873108 RCG17_RS19335 WP_308171713.1 3809772..3809972(+) (comZ) [Neobacillus sp. PS3-12]
ATGAATACACCAGATAAATCCATGGAATTTATGCAAATTGCCATGAAGTACTTCCCACAGGCTAAGGAACAATTAGACAA
AGCAGGAGTTGAATTATCATTTGATGTGATTCAACCGTTCATGGAATTATTTACAAAAGTTATGCAAGAAGCATATGAAC
TTGGCAGGGAAGAAGCACTCAAAGAAGTAAAACAGGATTAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(5-59)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

66.102

89.394

0.591