Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | AABJ61_RS20380 | Genome accession | NZ_AP027550 |
| Coordinates | 4199632..4200147 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130210.1 | Uniprot ID | B6I678 |
| Organism | Escherichia coli strain LR-51 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4194632..4205147
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AABJ61_RS20335 (VEE01_38640) | csrA | 4195084..4195269 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| AABJ61_RS20365 (VEE01_38650) | yqaB | 4196862..4197428 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| AABJ61_RS20370 (VEE01_38660) | yqaA | 4197425..4197853 (+) | 429 | WP_001287457.1 | YqaA family protein | - |
| AABJ61_RS20375 (VEE01_38670) | gshA | 4197926..4199482 (+) | 1557 | WP_000611802.1 | glutamate--cysteine ligase | - |
| AABJ61_RS20380 (VEE01_38680) | luxS | 4199632..4200147 (+) | 516 | WP_001130210.1 | S-ribosylhomocysteine lyase | Regulator |
| AABJ61_RS20385 (VEE01_38690) | emrB | 4200211..4201749 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| AABJ61_RS20390 (VEE01_38700) | emrA | 4201766..4202938 (-) | 1173 | WP_001295175.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| AABJ61_RS20395 (VEE01_38710) | emrR | 4203065..4203595 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| AABJ61_RS20400 (VEE01_38720) | ygaH | 4203686..4204021 (-) | 336 | WP_000119763.1 | L-valine transporter subunit YgaH | - |
| AABJ61_RS20405 (VEE01_38730) | ygaZ | 4204011..4204748 (-) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19417.13 Da Isoelectric Point: 4.7556
>NTDB_id=87298 AABJ61_RS20380 WP_001130210.1 4199632..4200147(+) (luxS) [Escherichia coli strain LR-51]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=87298 AABJ61_RS20380 WP_001130210.1 4199632..4200147(+) (luxS) [Escherichia coli strain LR-51]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |