Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   RCG19_RS14960 Genome accession   NZ_CP133265
Coordinates   3047477..3048286 (+) Length   269 a.a.
NCBI ID   WP_308107792.1    Uniprot ID   -
Organism   Neobacillus sp. OS1-2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 3042477..3053286
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RCG19_RS14935 (RCG19_14935) - 3043646..3044641 (+) 996 WP_308107788.1 homoserine dehydrogenase -
  RCG19_RS14940 (RCG19_14940) - 3044823..3046121 (+) 1299 WP_308107789.1 glycosyltransferase -
  RCG19_RS14945 (RCG19_14945) - 3046142..3046825 (+) 684 WP_308107790.1 glycosyltransferase family A protein -
  RCG19_RS14950 (RCG19_14950) - 3046879..3047061 (-) 183 WP_166244825.1 YfhD family protein -
  RCG19_RS14955 (RCG19_14955) - 3047170..3047304 (-) 135 WP_166244826.1 YfhE family protein -
  RCG19_RS14960 (RCG19_14960) recX 3047477..3048286 (+) 810 WP_308107792.1 recombination regulator RecX Regulator
  RCG19_RS14965 (RCG19_14965) - 3048296..3048973 (-) 678 WP_308107793.1 SDR family oxidoreductase -
  RCG19_RS14970 (RCG19_14970) - 3049059..3049382 (+) 324 WP_166244866.1 YfhH family protein -
  RCG19_RS14975 (RCG19_14975) - 3049421..3049591 (-) 171 WP_308107794.1 small, acid-soluble spore protein K -
  RCG19_RS14980 (RCG19_14980) - 3049735..3050715 (-) 981 WP_308107795.1 metal-dependent hydrolase -
  RCG19_RS14985 (RCG19_14985) mutY 3050828..3051919 (+) 1092 WP_308107796.1 A/G-specific adenine glycosylase -
  RCG19_RS14990 (RCG19_14990) - 3051956..3052138 (-) 183 WP_308107797.1 hypothetical protein -
  RCG19_RS14995 (RCG19_14995) fabL 3052257..3053006 (+) 750 WP_166244833.1 enoyl-[acyl-carrier-protein] reductase FabL -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 31772.81 Da        Isoelectric Point: 8.8901

>NTDB_id=872978 RCG19_RS14960 WP_308107792.1 3047477..3048286(+) (recX) [Neobacillus sp. OS1-2]
MAIITKITTQQKNKDRFNVFMDYGKGEEFAFSVDSDVFIKHQLKKGMELDDFSLLEIQYQDDIRKAYNLAVNYLARRMRA
EKEIKDYLLKKEIDEPIIKEVIHRLTAQKYINDEEFALAFVRTLANTTDKGPNVIKMELREKGMEEKILQRALEEFPLEQ
QIEKATKLSKKLLQKYAKESPKIQKQKLENVLIRKGYSFEVIAMVISEIEMPKEADEEMNAIRHQGEKAHRKFSQLVGYE
YQQKMKQVLYRKGFSLDLIERFLAELENS

Nucleotide


Download         Length: 810 bp        

>NTDB_id=872978 RCG19_RS14960 WP_308107792.1 3047477..3048286(+) (recX) [Neobacillus sp. OS1-2]
TTGGCCATTATAACAAAGATCACCACGCAGCAGAAAAATAAAGATCGTTTTAATGTGTTCATGGATTATGGCAAAGGCGA
AGAATTTGCATTTAGTGTTGATAGTGATGTATTCATCAAACATCAATTAAAAAAGGGAATGGAGCTTGATGATTTTTCAC
TCTTAGAAATTCAATACCAAGATGACATTCGCAAGGCCTACAACCTAGCCGTAAATTATTTGGCAAGAAGAATGAGAGCG
GAAAAAGAGATTAAGGATTACCTTCTAAAAAAGGAAATAGACGAACCAATCATAAAAGAAGTCATACATAGGTTGACCGC
TCAAAAATACATCAATGATGAGGAATTTGCGTTAGCCTTCGTAAGGACACTAGCGAATACAACTGATAAAGGCCCTAATG
TCATCAAAATGGAATTAAGGGAAAAGGGAATGGAAGAGAAGATTCTCCAACGCGCCCTAGAAGAATTTCCCTTAGAGCAG
CAGATTGAAAAAGCAACGAAGCTAAGCAAAAAGCTACTTCAAAAGTATGCAAAGGAATCACCTAAAATTCAAAAACAAAA
GCTTGAGAATGTCTTGATTAGAAAAGGGTATTCTTTTGAGGTAATAGCTATGGTTATCAGTGAAATAGAAATGCCTAAAG
AGGCTGATGAAGAGATGAATGCCATCAGACATCAAGGTGAAAAGGCGCATCGGAAATTTTCCCAATTAGTTGGGTATGAG
TATCAGCAAAAGATGAAACAGGTTTTATATAGAAAAGGTTTTTCACTCGATCTAATTGAAAGGTTTCTTGCTGAATTAGA
AAACTCATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(88-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

49.064

99.257

0.487