Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | RCG19_RS02295 | Genome accession | NZ_CP133265 |
| Coordinates | 430763..431848 (+) | Length | 361 a.a. |
| NCBI ID | WP_308109528.1 | Uniprot ID | - |
| Organism | Neobacillus sp. OS1-2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 425763..436848
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RCG19_RS02280 (RCG19_02280) | gcvT | 426159..427261 (-) | 1103 | Protein_452 | glycine cleavage system aminomethyltransferase GcvT | - |
| RCG19_RS02285 (RCG19_02285) | - | 427779..429467 (+) | 1689 | WP_308109526.1 | SNF2-related protein | - |
| RCG19_RS02290 (RCG19_02290) | - | 429445..430236 (+) | 792 | WP_308109527.1 | YqhG family protein | - |
| RCG19_RS02295 (RCG19_02295) | comGA | 430763..431848 (+) | 1086 | WP_308109528.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RCG19_RS02300 (RCG19_02300) | comGB | 431790..432866 (+) | 1077 | WP_308109529.1 | competence type IV pilus assembly protein ComGB | - |
| RCG19_RS02305 (RCG19_02305) | comGC | 432887..433204 (+) | 318 | WP_308109530.1 | competence type IV pilus major pilin ComGC | - |
| RCG19_RS02310 (RCG19_02310) | comGD | 433204..433644 (+) | 441 | WP_308109531.1 | competence type IV pilus minor pilin ComGD | - |
| RCG19_RS02315 (RCG19_02315) | comGE | 433628..433966 (+) | 339 | WP_308109532.1 | competence type IV pilus minor pilin ComGE | - |
| RCG19_RS02320 (RCG19_02320) | comGF | 433923..434390 (+) | 468 | WP_308110910.1 | competence type IV pilus minor pilin ComGF | - |
| RCG19_RS02325 (RCG19_02325) | comGG | 434387..434770 (+) | 384 | WP_308109533.1 | competence type IV pilus minor pilin ComGG | - |
| RCG19_RS02330 (RCG19_02330) | - | 434832..435017 (+) | 186 | WP_308109534.1 | YqzE family protein | - |
| RCG19_RS02335 (RCG19_02335) | - | 435247..435945 (+) | 699 | WP_308109535.1 | helix-turn-helix domain-containing protein | - |
| RCG19_RS02340 (RCG19_02340) | - | 436030..436272 (+) | 243 | WP_066385429.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 40526.94 Da Isoelectric Point: 8.2527
>NTDB_id=872951 RCG19_RS02295 WP_308109528.1 430763..431848(+) (comGA) [Neobacillus sp. OS1-2]
MVLPIVSAIEILANRIITDAARNQATDIHIIPRKNDTLVQIRLTNKLIPRLSLPKDECDRLISHFKFTANMDIGERRRPQ
SGAIFCEVDGQLMGLRLSTLPSNNRESLVIRLLPQQEQIPFHQLSLFPAMTRKLLALLKHAHGLIIFTGPTGSGKTTTLY
SLLNETAHLFHRNVITLEDPIEKNYDSVLQVQVNEKAGVTYAAGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLV
LSTMHTRDAKGAVYRLREFGANWLEVEQTLIAVTAQRLVELTCPFCEGDCSPLCYSYGRWKRASVFELLAGRNLHSAMKL
AKGEKVESHYKTLREVINKGIALGYIQESEYERLVYDDEAP
MVLPIVSAIEILANRIITDAARNQATDIHIIPRKNDTLVQIRLTNKLIPRLSLPKDECDRLISHFKFTANMDIGERRRPQ
SGAIFCEVDGQLMGLRLSTLPSNNRESLVIRLLPQQEQIPFHQLSLFPAMTRKLLALLKHAHGLIIFTGPTGSGKTTTLY
SLLNETAHLFHRNVITLEDPIEKNYDSVLQVQVNEKAGVTYAAGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLV
LSTMHTRDAKGAVYRLREFGANWLEVEQTLIAVTAQRLVELTCPFCEGDCSPLCYSYGRWKRASVFELLAGRNLHSAMKL
AKGEKVESHYKTLREVINKGIALGYIQESEYERLVYDDEAP
Nucleotide
Download Length: 1086 bp
>NTDB_id=872951 RCG19_RS02295 WP_308109528.1 430763..431848(+) (comGA) [Neobacillus sp. OS1-2]
GTGGTGTTACCTATTGTTAGCGCAATTGAAATTTTAGCGAATCGGATCATTACAGATGCAGCACGAAACCAAGCAACAGA
TATTCACATTATACCTCGGAAGAATGACACACTCGTGCAAATCCGATTAACCAACAAACTTATTCCCCGGTTATCCCTTC
CAAAAGATGAATGCGACAGATTAATCTCACATTTTAAATTCACAGCCAATATGGATATCGGAGAAAGAAGACGCCCGCAA
AGCGGAGCCATTTTTTGTGAGGTAGACGGACAATTAATGGGACTTAGGCTTTCAACACTTCCATCAAACAACAGAGAGAG
CCTTGTCATCAGGCTTTTACCCCAACAAGAACAGATTCCATTTCACCAACTCTCATTATTCCCGGCAATGACGCGAAAAT
TACTAGCTCTTCTCAAACATGCACATGGTTTAATCATTTTTACCGGGCCTACTGGCTCGGGCAAGACCACAACTCTCTAC
TCGCTTTTAAATGAAACTGCCCACTTATTTCATCGCAATGTCATCACACTCGAAGATCCTATCGAAAAAAACTATGACTC
TGTTTTGCAAGTCCAAGTCAATGAAAAAGCTGGCGTTACGTATGCGGCCGGTTTAAAGGCAATTCTTCGCCATGATCCGG
ATATCATCATGGTTGGTGAAATCAGGGATGCTGAAACTGCCAAAATAGCTGTCCGAGCAGCCCTCACTGGGCATTTGGTA
CTATCAACGATGCATACTAGGGATGCCAAGGGTGCAGTATACCGTCTCCGTGAATTTGGTGCGAATTGGCTAGAGGTCGA
GCAGACGTTAATTGCTGTCACAGCACAAAGGCTAGTAGAACTTACATGCCCATTTTGTGAAGGAGATTGTTCGCCGCTTT
GTTACTCCTATGGAAGATGGAAGAGGGCGAGTGTGTTTGAGTTGTTAGCGGGAAGAAATTTACATTCAGCCATGAAGTTA
GCTAAAGGGGAAAAAGTCGAATCACATTACAAAACACTTAGAGAAGTGATTAACAAGGGAATAGCCCTTGGATACATTCA
AGAATCAGAATATGAACGGCTGGTGTACGATGATGAAGCCCCATAA
GTGGTGTTACCTATTGTTAGCGCAATTGAAATTTTAGCGAATCGGATCATTACAGATGCAGCACGAAACCAAGCAACAGA
TATTCACATTATACCTCGGAAGAATGACACACTCGTGCAAATCCGATTAACCAACAAACTTATTCCCCGGTTATCCCTTC
CAAAAGATGAATGCGACAGATTAATCTCACATTTTAAATTCACAGCCAATATGGATATCGGAGAAAGAAGACGCCCGCAA
AGCGGAGCCATTTTTTGTGAGGTAGACGGACAATTAATGGGACTTAGGCTTTCAACACTTCCATCAAACAACAGAGAGAG
CCTTGTCATCAGGCTTTTACCCCAACAAGAACAGATTCCATTTCACCAACTCTCATTATTCCCGGCAATGACGCGAAAAT
TACTAGCTCTTCTCAAACATGCACATGGTTTAATCATTTTTACCGGGCCTACTGGCTCGGGCAAGACCACAACTCTCTAC
TCGCTTTTAAATGAAACTGCCCACTTATTTCATCGCAATGTCATCACACTCGAAGATCCTATCGAAAAAAACTATGACTC
TGTTTTGCAAGTCCAAGTCAATGAAAAAGCTGGCGTTACGTATGCGGCCGGTTTAAAGGCAATTCTTCGCCATGATCCGG
ATATCATCATGGTTGGTGAAATCAGGGATGCTGAAACTGCCAAAATAGCTGTCCGAGCAGCCCTCACTGGGCATTTGGTA
CTATCAACGATGCATACTAGGGATGCCAAGGGTGCAGTATACCGTCTCCGTGAATTTGGTGCGAATTGGCTAGAGGTCGA
GCAGACGTTAATTGCTGTCACAGCACAAAGGCTAGTAGAACTTACATGCCCATTTTGTGAAGGAGATTGTTCGCCGCTTT
GTTACTCCTATGGAAGATGGAAGAGGGCGAGTGTGTTTGAGTTGTTAGCGGGAAGAAATTTACATTCAGCCATGAAGTTA
GCTAAAGGGGAAAAAGTCGAATCACATTACAAAACACTTAGAGAAGTGATTAACAAGGGAATAGCCCTTGGATACATTCA
AGAATCAGAATATGAACGGCTGGTGTACGATGATGAAGCCCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.338 |
98.338 |
0.554 |
| pilB | Glaesserella parasuis strain SC1401 |
39.828 |
96.676 |
0.385 |