Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   RCG24_RS02280 Genome accession   NZ_CP133263
Coordinates   435491..437179 (+) Length   562 a.a.
NCBI ID   WP_308078218.1    Uniprot ID   -
Organism   Neobacillus sp. OS1-32     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 430491..442179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RCG24_RS02265 (RCG24_02265) - 432182..433015 (+) 834 WP_308078216.1 TlyA family RNA methyltransferase -
  RCG24_RS02270 (RCG24_02270) - 433227..434543 (+) 1317 WP_308077762.1 IS1380 family transposase -
  RCG24_RS02275 (RCG24_02275) ahrC 435026..435475 (+) 450 WP_308078217.1 transcriptional regulator AhrC/ArgR -
  RCG24_RS02280 (RCG24_02280) recN 435491..437179 (+) 1689 WP_308078218.1 DNA repair protein RecN Machinery gene
  RCG24_RS02285 (RCG24_02285) spoIVB 437293..438588 (+) 1296 WP_374049115.1 SpoIVB peptidase -
  RCG24_RS02290 (RCG24_02290) spo0A 438875..439670 (+) 796 Protein_429 sporulation transcription factor Spo0A -
  RCG24_RS02295 (RCG24_02295) - 439880..441223 (+) 1344 WP_308077365.1 ISLre2 family transposase -

Sequence

Protein


Download         Length: 562 a.a.        Molecular weight: 63876.74 Da        Isoelectric Point: 5.2167

>NTDB_id=872889 RCG24_RS02280 WP_308078218.1 435491..437179(+) (recN) [Neobacillus sp. OS1-32]
MLAELSIKNFAIIEKVSISFEKGLTVLTGETGAGKSIIIDAIHLLTGGRGSAEFVRHGEDKAEIEGLFQIDNPNHPVYGK
TLEFGIDIEEGMVILRRDIFRSGKSVCRINGKLVTISILREVGATLVDIHGQHEHQELMDETRHLPLLDQFGAGEIAASL
QEYQQIFHRFEQTQSRLKALSENDRQMAHRLDLIQFQYDEIQKANLKLNEDEELLEEKRKLANFEKIYEAIQLSFSGLQG
EQRGLDWIGLVMGHMENAASLDASYKELYEAVANSYYQLEDTARSLRNQLDILEYDPQRLNEIEDRLNEINQLKRKYGKT
IPEILEYAAKIEEEIETIQNKETHITELEKELNSIKKDLRIEAKQLTELRHKWGEKLTGLIHKELKDLYMDKTVFEIRFE
TEQDHFSRNGADHVEFYISTNPGEPLKPLTKIASGGELSRIMLALKSIFSKHQGVTSIIFDEVDTGVSGRVAQAIAEKIY
KVALDSQVLCISHLPQVAAMADTHLFISKMIKEGRTSTAVTALTEQEKIKEISRMISGVEITDLTKQHAEELLHLAAETK
RT

Nucleotide


Download         Length: 1689 bp        

>NTDB_id=872889 RCG24_RS02280 WP_308078218.1 435491..437179(+) (recN) [Neobacillus sp. OS1-32]
TTGCTAGCAGAACTTTCAATTAAAAATTTTGCAATCATTGAAAAGGTATCGATTTCCTTTGAAAAGGGGCTGACCGTGTT
AACCGGCGAAACCGGTGCCGGGAAGTCAATTATTATCGATGCCATTCATTTGTTGACAGGCGGGAGAGGATCGGCAGAAT
TTGTCCGGCATGGGGAGGATAAGGCTGAAATAGAAGGCTTATTTCAAATTGATAATCCCAATCATCCTGTTTACGGCAAG
ACGCTCGAATTTGGCATCGATATCGAAGAAGGAATGGTTATCTTAAGGCGTGATATTTTTCGTTCGGGAAAAAGTGTCTG
CCGGATCAATGGCAAGTTAGTAACGATCTCCATTCTTCGCGAAGTGGGGGCAACACTGGTTGATATTCACGGGCAGCATG
AACATCAAGAACTAATGGATGAGACAAGACATTTACCGTTACTTGATCAATTTGGTGCCGGGGAGATTGCAGCTTCCTTG
CAGGAGTACCAGCAAATATTTCATCGCTTTGAACAGACGCAAAGCCGGTTAAAGGCGCTGAGCGAAAATGATCGGCAAAT
GGCACATAGGCTGGATTTAATCCAATTTCAATATGATGAAATCCAAAAGGCAAATTTAAAGCTCAATGAGGATGAAGAGC
TGCTTGAAGAAAAAAGGAAACTGGCGAATTTTGAAAAAATTTATGAAGCGATTCAATTAAGCTTTTCCGGCCTGCAAGGT
GAACAAAGAGGGCTGGATTGGATCGGCCTGGTTATGGGACATATGGAAAATGCCGCCTCGCTGGATGCATCTTATAAGGA
ATTATATGAGGCAGTTGCCAACAGTTATTACCAATTAGAAGATACTGCCCGATCATTAAGAAATCAATTGGATATTTTAG
AGTATGATCCGCAAAGGTTAAATGAAATTGAAGATCGCTTAAATGAAATCAACCAGTTAAAGCGAAAATACGGGAAAACA
ATTCCGGAAATATTAGAATATGCAGCCAAAATTGAAGAGGAAATCGAAACCATTCAAAATAAAGAAACACATATAACTGA
ATTGGAAAAGGAACTGAACTCCATTAAAAAAGATTTGAGAATTGAAGCCAAACAGCTGACAGAACTTCGCCATAAATGGG
GAGAAAAGCTGACAGGATTGATACATAAAGAACTAAAAGATTTGTATATGGATAAAACCGTTTTTGAAATACGCTTTGAA
ACGGAACAGGATCATTTTTCCAGAAATGGCGCAGACCATGTTGAATTTTATATTTCGACCAATCCTGGTGAACCATTAAA
GCCTTTAACAAAAATTGCCTCGGGTGGCGAATTGTCTCGGATTATGCTGGCATTAAAAAGTATTTTTTCCAAGCACCAGG
GTGTTACCTCGATAATATTTGATGAGGTGGATACCGGAGTAAGCGGCAGGGTTGCTCAGGCCATTGCTGAAAAGATTTAT
AAAGTGGCGCTCGATTCTCAGGTCTTATGCATTTCCCATTTGCCTCAGGTTGCTGCCATGGCCGACACCCATTTGTTTAT
ATCTAAGATGATTAAAGAAGGTAGAACATCAACGGCTGTAACCGCATTAACTGAACAAGAGAAAATTAAGGAAATCAGCC
GGATGATTTCCGGAGTAGAAATTACCGATTTGACAAAGCAGCATGCAGAGGAGCTACTTCATCTGGCAGCGGAAACAAAA
AGAACTTGA

Domains

Predicted by InterProScan.

AAA domain (AAA_23)

(4-231)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

58.854

100

0.603