Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | RCG22_RS22710 | Genome accession | NZ_CP133262 |
| Coordinates | 4658942..4660027 (-) | Length | 361 a.a. |
| NCBI ID | WP_308104815.1 | Uniprot ID | - |
| Organism | Neobacillus sp. OS1-33 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4653942..4665027
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RCG22_RS22665 (RCG22_22665) | - | 4654343..4654585 (-) | 243 | WP_066257603.1 | DUF2626 domain-containing protein | - |
| RCG22_RS22670 (RCG22_22670) | - | 4654670..4655368 (-) | 699 | WP_308104807.1 | helix-turn-helix domain-containing protein | - |
| RCG22_RS22675 (RCG22_22675) | - | 4655601..4655786 (-) | 186 | WP_098259523.1 | YqzE family protein | - |
| RCG22_RS22680 (RCG22_22680) | comGG | 4655834..4656220 (-) | 387 | WP_308104808.1 | competence type IV pilus minor pilin ComGG | - |
| RCG22_RS22685 (RCG22_22685) | comGF | 4656217..4656693 (-) | 477 | WP_308104809.1 | competence type IV pilus minor pilin ComGF | - |
| RCG22_RS22690 (RCG22_22690) | - | 4656641..4656976 (-) | 336 | WP_308104810.1 | hypothetical protein | - |
| RCG22_RS22695 (RCG22_22695) | comGD | 4656960..4657400 (-) | 441 | WP_308104812.1 | competence type IV pilus minor pilin ComGD | - |
| RCG22_RS22700 (RCG22_22700) | comGC | 4657400..4657720 (-) | 321 | WP_308104813.1 | competence type IV pilus major pilin ComGC | - |
| RCG22_RS22705 (RCG22_22705) | comGB | 4657924..4658976 (-) | 1053 | WP_308104814.1 | competence type IV pilus assembly protein ComGB | - |
| RCG22_RS22710 (RCG22_22710) | comGA | 4658942..4660027 (-) | 1086 | WP_308104815.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RCG22_RS22715 (RCG22_22715) | - | 4660197..4660988 (-) | 792 | WP_308104816.1 | YqhG family protein | - |
| RCG22_RS22720 (RCG22_22720) | - | 4660966..4662654 (-) | 1689 | WP_308104817.1 | SNF2-related protein | - |
| RCG22_RS22725 (RCG22_22725) | gcvT | 4663087..4664190 (+) | 1104 | WP_308104818.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 361 a.a. Molecular weight: 40693.08 Da Isoelectric Point: 7.7617
>NTDB_id=872873 RCG22_RS22710 WP_308104815.1 4658942..4660027(-) (comGA) [Neobacillus sp. OS1-33]
MVVPIVSEIEILANRIITDAARNQATDIHIIPRKKDTLVQIRLTNKLIPRLSLPKDECDRLISHFKFTANMDIGERRRPQ
SGAFFCEVDGNLMGLRLSTLPSNNRESLVIRLLPQQEQIPFHQLSLFPSMTRKLLALLKHAHGLIIFTGPTGSGKTTTLY
SLLNETAHLFHRNVITLEDPIEKNYDSVLQIQVNEKAGVTYAAGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLV
LSTMHTRDSKGAVYRLHEFGVNWLEVEQTLIAITAQRLVELTCPFCEGDCSPICYSYGRWKRASVFELLSGRNLHAVMKA
AQGEQIEIRYRVLKDVINKGIALGYIQESEFERLVYDDESS
MVVPIVSEIEILANRIITDAARNQATDIHIIPRKKDTLVQIRLTNKLIPRLSLPKDECDRLISHFKFTANMDIGERRRPQ
SGAFFCEVDGNLMGLRLSTLPSNNRESLVIRLLPQQEQIPFHQLSLFPSMTRKLLALLKHAHGLIIFTGPTGSGKTTTLY
SLLNETAHLFHRNVITLEDPIEKNYDSVLQIQVNEKAGVTYAAGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLV
LSTMHTRDSKGAVYRLHEFGVNWLEVEQTLIAITAQRLVELTCPFCEGDCSPICYSYGRWKRASVFELLSGRNLHAVMKA
AQGEQIEIRYRVLKDVINKGIALGYIQESEFERLVYDDESS
Nucleotide
Download Length: 1086 bp
>NTDB_id=872873 RCG22_RS22710 WP_308104815.1 4658942..4660027(-) (comGA) [Neobacillus sp. OS1-33]
GTGGTGGTACCTATTGTTAGCGAGATAGAAATTTTAGCAAATCGAATCATTACAGATGCAGCACGGAACCAGGCAACAGA
TATTCACATTATCCCTAGGAAGAAAGACACGCTCGTCCAAATCCGATTAACCAACAAGCTCATACCTCGACTATCCCTTC
CAAAAGATGAATGCGACAGATTAATCTCACATTTTAAATTCACAGCCAATATGGATATCGGAGAAAGAAGACGACCACAA
AGTGGAGCTTTTTTTTGCGAAGTCGACGGAAATTTAATGGGTCTCAGACTTTCCACTCTCCCTTCTAATAACAGAGAGAG
CCTTGTCATTAGGCTGTTACCACAGCAAGAACAGATACCTTTTCACCAACTTTCACTTTTCCCATCAATGACCCGAAAAC
TACTCGCTCTTCTCAAACATGCTCATGGTTTAATTATCTTCACCGGGCCAACAGGCTCGGGCAAAACCACAACACTCTAT
TCTTTATTAAACGAAACTGCCCACTTATTTCATCGTAATGTTATCACACTCGAAGATCCCATTGAAAAAAACTATGACTC
CGTCTTGCAAATTCAAGTGAATGAAAAAGCAGGCGTAACTTATGCAGCCGGATTGAAGGCGATTCTTCGTCATGACCCTG
ACATTATTATGGTGGGTGAAATAAGAGATGCTGAAACAGCAAAAATTGCCGTTAGAGCAGCATTAACAGGGCACTTAGTG
CTTTCGACGATGCATACCCGTGATTCTAAGGGTGCGGTTTATCGACTGCATGAGTTTGGGGTCAATTGGTTAGAGGTCGA
GCAGACGCTCATTGCGATAACCGCTCAAAGGCTAGTTGAACTAACCTGCCCCTTTTGTGAAGGAGATTGTTCACCTATTT
GTTATTCCTACGGCAGATGGAAACGCGCCAGTGTGTTTGAACTTTTATCAGGAAGAAATTTACATGCAGTAATGAAAGCT
GCCCAAGGAGAACAAATTGAGATACGTTACCGCGTGTTAAAGGATGTAATTAATAAAGGCATTGCCCTTGGGTATATTCA
AGAATCTGAATTTGAACGTTTGGTGTATGATGATGAATCGTCATAA
GTGGTGGTACCTATTGTTAGCGAGATAGAAATTTTAGCAAATCGAATCATTACAGATGCAGCACGGAACCAGGCAACAGA
TATTCACATTATCCCTAGGAAGAAAGACACGCTCGTCCAAATCCGATTAACCAACAAGCTCATACCTCGACTATCCCTTC
CAAAAGATGAATGCGACAGATTAATCTCACATTTTAAATTCACAGCCAATATGGATATCGGAGAAAGAAGACGACCACAA
AGTGGAGCTTTTTTTTGCGAAGTCGACGGAAATTTAATGGGTCTCAGACTTTCCACTCTCCCTTCTAATAACAGAGAGAG
CCTTGTCATTAGGCTGTTACCACAGCAAGAACAGATACCTTTTCACCAACTTTCACTTTTCCCATCAATGACCCGAAAAC
TACTCGCTCTTCTCAAACATGCTCATGGTTTAATTATCTTCACCGGGCCAACAGGCTCGGGCAAAACCACAACACTCTAT
TCTTTATTAAACGAAACTGCCCACTTATTTCATCGTAATGTTATCACACTCGAAGATCCCATTGAAAAAAACTATGACTC
CGTCTTGCAAATTCAAGTGAATGAAAAAGCAGGCGTAACTTATGCAGCCGGATTGAAGGCGATTCTTCGTCATGACCCTG
ACATTATTATGGTGGGTGAAATAAGAGATGCTGAAACAGCAAAAATTGCCGTTAGAGCAGCATTAACAGGGCACTTAGTG
CTTTCGACGATGCATACCCGTGATTCTAAGGGTGCGGTTTATCGACTGCATGAGTTTGGGGTCAATTGGTTAGAGGTCGA
GCAGACGCTCATTGCGATAACCGCTCAAAGGCTAGTTGAACTAACCTGCCCCTTTTGTGAAGGAGATTGTTCACCTATTT
GTTATTCCTACGGCAGATGGAAACGCGCCAGTGTGTTTGAACTTTTATCAGGAAGAAATTTACATGCAGTAATGAAAGCT
GCCCAAGGAGAACAAATTGAGATACGTTACCGCGTGTTAAAGGATGTAATTAATAAAGGCATTGCCCTTGGGTATATTCA
AGAATCTGAATTTGAACGTTTGGTGTATGATGATGAATCGTCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
54.93 |
98.338 |
0.54 |
| pilB | Glaesserella parasuis strain SC1401 |
42.671 |
85.042 |
0.363 |