Detailed information NTG0872755

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: RCF71_RS06255
• Genome accession: NZ_CP133244
• Coordinates: 1252489..1252806 (+)
• Length: 105 a.a.
• NCBI ID: WP_037573894.1
• Uniprot ID: A0AAE5W8Q2
• Organism: Staphylococcus chromogenes strain IM
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1247489..1257806

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RCF71_RS06225 (RCF71_06205)	-	1248276..1248479 (+)	204	WP_037573910.1	YqgQ family protein	-
RCF71_RS06230 (RCF71_06210)	-	1248476..1249462 (+)	987	WP_037573907.1	ROK family glucokinase	-
RCF71_RS06235 (RCF71_06215)	-	1249463..1249774 (+)	312	WP_419790237.1	MTH1187 family thiamine-binding protein	-
RCF71_RS06240 (RCF71_06220)	-	1249788..1250411 (+)	624	WP_037573902.1	MBL fold metallo-hydrolase	-
RCF71_RS06245 (RCF71_06225)	comGA	1250464..1251438 (+)	975	WP_037573899.1	competence type IV pilus ATPase ComGA	Machinery gene
RCF71_RS06250 (RCF71_06230)	comGB	1251407..1252474 (+)	1068	WP_037573896.1	competence type IV pilus assembly protein ComGB	-
RCF71_RS06255 (RCF71_06235)	comGC	1252489..1252806 (+)	318	WP_037573894.1	competence type IV pilus major pilin ComGC	Machinery gene
RCF71_RS06260 (RCF71_06240)	comGD	1252796..1253227 (+)	432	WP_051604961.1	competence type IV pilus minor pilin ComGD	-
RCF71_RS06265 (RCF71_06245)	-	1253420..1253905 (+)	486	WP_157946193.1	competence type IV pilus minor pilin ComGF	-
RCF71_RS06270 (RCF71_06250)	-	1254070..1254594 (+)	525	WP_084276016.1	shikimate kinase	-
RCF71_RS06275 (RCF71_06255)	gcvT	1254747..1255838 (+)	1092	WP_037573883.1	glycine cleavage system aminomethyltransferase GcvT	-
RCF71_RS06280 (RCF71_06260)	gcvPA	1255851..1257200 (+)	1350	WP_419790238.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 105 a.a.
• Molecular weight: 11801.05 Da
• Isoelectric Point: 9.5646

>NTDB_id=872755 RCF71_RS06255 WP_037573894.1 1252489..1252806(+) (comGC) [Staphylococcus chromogenes strain IM]
MKLFKKLKENKGFTLIEMLLVLLIISVLLILIIPNIAKQSEHIQKTGCSAQLKLVESQIEAYTLKFNRKPSTIDELVQEG
YIKENQKSCKNGDTIILRGGEAVVS

Nucleotide

• Length: 318 bp

>NTDB_id=872755 RCF71_RS06255 WP_037573894.1 1252489..1252806(+) (comGC) [Staphylococcus chromogenes strain IM]
ATGAAATTATTTAAAAAGTTAAAAGAAAACAAGGGGTTTACGTTAATTGAAATGCTTTTAGTTTTGTTAATTATAAGTGT
ACTTTTAATACTAATTATTCCTAATATTGCTAAACAATCAGAACATATTCAAAAAACAGGTTGTTCAGCACAACTTAAAT
TAGTCGAAAGTCAAATTGAAGCATATACTTTGAAATTTAATCGAAAACCTTCAACAATCGACGAACTTGTTCAAGAAGGT
TATATCAAAGAAAATCAAAAATCATGCAAAAATGGAGACACCATCATATTACGTGGCGGAGAAGCCGTTGTTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus N315	66.99	98.095	0.657
comGC	Staphylococcus aureus MW2	66.99	98.095	0.657
comYC	Streptococcus gordonii str. Challis substr. CH1	50	81.905	0.41
comGC	Bacillus subtilis subsp. subtilis str. 168	44.681	89.524	0.4
comGC/cglC	Streptococcus pneumoniae R6	47.674	81.905	0.39
comGC/cglC	Streptococcus pneumoniae TIGR4	47.674	81.905	0.39
comGC/cglC	Streptococcus pneumoniae Rx1	47.674	81.905	0.39
comGC/cglC	Streptococcus pneumoniae D39	47.674	81.905	0.39
comGC/cglC	Streptococcus mitis SK321	49.383	77.143	0.381
comYC	Streptococcus mutans UA140	51.948	73.333	0.381
comYC	Streptococcus mutans UA159	51.948	73.333	0.381
comYC	Streptococcus suis isolate S10	51.316	72.381	0.371
comGC/cglC	Streptococcus mitis NCTC 12261	51.316	72.381	0.371