Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | K6J86_RS06040 | Genome accession | NZ_AP024627 |
| Coordinates | 1178810..1179763 (+) | Length | 317 a.a. |
| NCBI ID | WP_003245494.1 | Uniprot ID | A0AAE2SG99 |
| Organism | Bacillus subtilis strain BEST3136 | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1173810..1184763
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K6J86_RS06015 (BsBEST3136_11300) | argF | 1175642..1176601 (+) | 960 | WP_003232980.1 | ornithine carbamoyltransferase | - |
| K6J86_RS06020 (BsBEST3136_11310) | yjzC | 1176687..1176866 (+) | 180 | WP_003245356.1 | YjzC family protein | - |
| K6J86_RS06025 (BsBEST3136_11320) | yjzD | 1176912..1177097 (-) | 186 | WP_003245236.1 | YjzD family protein | - |
| K6J86_RS06030 (BsBEST3136_11330) | - | 1177346..1178080 (+) | 735 | WP_003245223.1 | hypothetical protein | - |
| K6J86_RS06035 (BsBEST3136_11340) | - | 1178162..1178719 (+) | 558 | WP_003232974.1 | hypothetical protein | - |
| K6J86_RS06040 (BsBEST3136_11350) | med | 1178810..1179763 (+) | 954 | WP_003245494.1 | transcriptional regulator Med | Regulator |
| K6J86_RS06045 (BsBEST3136_11360) | comZ | 1179778..1179969 (+) | 192 | WP_003224559.1 | ComG operon transcriptional repressor ComZ | Regulator |
| K6J86_RS06050 (BsBEST3136_11370) | yjzB | 1179999..1180238 (-) | 240 | WP_003232972.1 | spore coat protein YjzB | - |
| K6J86_RS06055 (BsBEST3136_11380) | fabH | 1180403..1181341 (+) | 939 | WP_003232971.1 | beta-ketoacyl-ACP synthase III | - |
| K6J86_RS06060 (BsBEST3136_11390) | fabF | 1181364..1182605 (+) | 1242 | WP_003244890.1 | beta-ketoacyl-ACP synthase II | - |
| K6J86_RS06065 (BsBEST3136_11400) | yjaZ | 1182681..1183466 (+) | 786 | WP_003232967.1 | DUF2268 domain-containing protein | - |
| K6J86_RS06070 (BsBEST3136_11410) | appD | 1183658..1184644 (+) | 987 | WP_003232965.1 | oligopeptide ABC transporter ATP-binding protein AppD | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35310.80 Da Isoelectric Point: 4.5457
>NTDB_id=87270 K6J86_RS06040 WP_003245494.1 1178810..1179763(+) (med) [Bacillus subtilis strain BEST3136]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE
Nucleotide
Download Length: 954 bp
>NTDB_id=87270 K6J86_RS06040 WP_003245494.1 1178810..1179763(+) (med) [Bacillus subtilis strain BEST3136]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACAAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |