Detailed information NTG0087265

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABJ61_RS13775
• Genome accession: NZ_AP027550
• Coordinates: 2840538..2841563 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain LR-51
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2835538..2846563

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABJ61_RS13765 (VEE01_26200)	rpmE	2837769..2837981 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABJ61_RS13770 (VEE01_26210)	priA	2838184..2840382 (+)	2199	WP_001350069.1	primosomal protein N'	Machinery gene
AABJ61_RS13775 (VEE01_26220)	cytR	2840538..2841563 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABJ61_RS13780 (VEE01_26230)	ftsN	2841655..2842614 (+)	960	WP_000068834.1	cell division protein FtsN	-
AABJ61_RS13785 (VEE01_26240)	hslV	2842707..2843237 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABJ61_RS13790 (VEE01_26250)	hslU	2843247..2844578 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
AABJ61_RS13795 (VEE01_26260)	menA	2844645..2845571 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABJ61_RS13800 (VEE01_26270)	rraA	2845664..2846149 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABJ61_RS13805 (VEE01_26280)	zapB	2846234..2846479 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=87265 AABJ61_RS13775 WP_000644904.1 2840538..2841563(+) (cytR) [Escherichia coli strain LR-51]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=87265 AABJ61_RS13775 WP_000644904.1 2840538..2841563(+) (cytR) [Escherichia coli strain LR-51]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628