Detailed information NTG0872627

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: RCF75_RS06425
• Genome accession: NZ_CP133229
• Coordinates: 1308324..1309298 (+)
• Length: 324 a.a.
• NCBI ID: WP_419795903.1
• Uniprot ID: -
• Organism: Staphylococcus equorum strain BTM
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1303324..1314298

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RCF75_RS06395 (RCF75_06390)	-	1303505..1304044 (+)	540	WP_069801563.1	5-formyltetrahydrofolate cyclo-ligase	-
RCF75_RS06400 (RCF75_06395)	-	1304059..1305516 (+)	1458	WP_419795902.1	rhomboid family intramembrane serine protease	-
RCF75_RS06405 (RCF75_06400)	-	1305500..1305700 (+)	201	WP_002512453.1	YqgQ family protein	-
RCF75_RS06410 (RCF75_06405)	-	1306290..1307276 (+)	987	WP_021339255.1	glucokinase	-
RCF75_RS06415 (RCF75_06410)	-	1307276..1307599 (+)	324	WP_021339254.1	MTH1187 family thiamine-binding protein	-
RCF75_RS06420 (RCF75_06415)	-	1307601..1308224 (+)	624	WP_069801557.1	MBL fold metallo-hydrolase	-
RCF75_RS06425 (RCF75_06420)	comGA	1308324..1309298 (+)	975	WP_419795903.1	competence type IV pilus ATPase ComGA	Machinery gene
RCF75_RS06430 (RCF75_06425)	comGB	1309270..1310337 (+)	1068	WP_021339252.1	competence type IV pilus assembly protein ComGB	-
RCF75_RS06435 (RCF75_06430)	comGC	1310362..1310679 (+)	318	WP_031265988.1	competence type IV pilus major pilin ComGC	Machinery gene
RCF75_RS06440 (RCF75_06435)	comGD	1310657..1311103 (+)	447	WP_069801555.1	competence type IV pilus minor pilin ComGD	-
RCF75_RS06445 (RCF75_06440)	comGF	1311090..1311803 (+)	714	WP_021339249.1	competence type IV pilus minor pilin ComGF	-
RCF75_RS06450 (RCF75_06445)	-	1312010..1312483 (+)	474	WP_236593604.1	shikimate kinase	-
RCF75_RS06455 (RCF75_06450)	gcvT	1312662..1313753 (+)	1092	WP_119559860.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37374.47 Da
• Isoelectric Point: 9.0566

>NTDB_id=872627 RCF75_RS06425 WP_419795903.1 1308324..1309298(+) (comGA) [Staphylococcus equorum strain BTM]
MKLLFNNIIEKAIQRNATDIHFIPSEKEVYIKFRIQDDLTFIESIRTHVYRKLLTYMKYQAGLDVSKHNSAQSGRYIYKL
KQIFYLRISTLPLSLGNESCVVRIIPQYFQKQNITHDIEKLYTLMNKKQGLILFSGPTGSGKSTLMYQMVMYAKEKLGLN
IITVEDPVEQLVEGVTQVSINEKAGINYESSFKAILRCDPDIILIGEVRDPTIAKYVIQASLSGHLVLTTIHANNCKGAL
LRLLEMSITKQEINQSILSVLNQRLITIYNSERKLIYEQLLQHDISYFLNNDYTLPNHFHNLSFHLKQMSKAGVICEETV
DRYI

Nucleotide

• Length: 975 bp

>NTDB_id=872627 RCF75_RS06425 WP_419795903.1 1308324..1309298(+) (comGA) [Staphylococcus equorum strain BTM]
TTGAAGCTATTATTTAACAACATAATTGAGAAAGCAATTCAGAGAAATGCTACTGATATACACTTTATACCTTCTGAAAA
GGAAGTGTATATCAAATTTAGAATTCAGGATGATTTAACTTTTATTGAATCAATTCGGACACATGTTTATAGAAAGCTGC
TTACTTATATGAAATATCAAGCTGGATTAGATGTATCAAAACATAATTCGGCACAAAGTGGAAGATACATATATAAACTA
AAACAAATATTTTATTTAAGAATCTCTACGTTACCATTGTCTCTCGGTAATGAAAGTTGTGTTGTAAGAATCATTCCTCA
ATATTTTCAAAAGCAAAATATCACTCATGATATTGAAAAACTGTATACATTAATGAATAAAAAGCAAGGTTTAATACTAT
TTAGCGGTCCAACTGGATCTGGTAAAAGTACTTTAATGTATCAAATGGTTATGTATGCAAAGGAAAAGTTAGGTTTAAAT
ATCATAACTGTAGAAGATCCGGTGGAACAATTAGTTGAGGGCGTTACTCAAGTTTCTATCAATGAAAAGGCAGGTATTAA
TTATGAGAGTTCTTTTAAGGCAATACTAAGGTGTGATCCAGACATTATACTTATTGGAGAAGTTAGAGATCCTACGATAG
CAAAATACGTTATACAAGCAAGTTTAAGTGGTCACTTAGTATTAACTACAATACATGCTAACAATTGTAAGGGCGCGTTA
TTAAGATTATTAGAAATGAGCATAACAAAACAAGAAATTAACCAATCTATTTTGAGTGTGTTAAACCAAAGACTAATCAC
AATATATAACAGTGAAAGAAAATTAATTTATGAACAGTTACTACAACACGATATAAGTTATTTTTTAAATAATGATTACA
CATTACCAAACCATTTTCATAATTTATCCTTTCATTTAAAGCAAATGTCTAAAGCAGGTGTTATTTGTGAAGAAACTGTT
GATCGCTATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (7-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	60.802	100	0.608
comGA	Staphylococcus aureus N315	60.802	100	0.608